Gene : Medtr4g010130 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Description:  sterol regulatory element-binding protein site 2 protease
Genomic Order:  296 Name:  ? Medtr4g010130
Secondary Identifier:  ? PAC:31108058
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g010130 0.5kb upstream 0.5kb upstream 4168 true chr4: 2235779-2239946 Medicago truncatula
Medtr4g010130 0.5kb upstream 0.5kb upstream 500 false chr4: 2235779-2236278 Medicago truncatula
Medtr4g010130 0.5kb downstream 0.5kb downstream 4168 true chr4: 2236279-2240446 Medicago truncatula
Medtr4g010130 0.5kb downstream 0.5kb downstream 500 false chr4: 2239947-2240446 Medicago truncatula
Medtr4g010130 1.0kb upstream 1.0kb upstream 4668 true chr4: 2235279-2239946 Medicago truncatula
Medtr4g010130 1.0kb upstream 1.0kb upstream 1000 false chr4: 2235279-2236278 Medicago truncatula
Medtr4g010130 1.0kb downstream 1.0kb downstream 4668 true chr4: 2236279-2240946 Medicago truncatula
Medtr4g010130 1.0kb downstream 1.0kb downstream 1000 false chr4: 2239947-2240946 Medicago truncatula
Medtr4g010130 2.0kb upstream 2.0kb upstream 5668 true chr4: 2234279-2239946 Medicago truncatula
Medtr4g010130 2.0kb upstream 2.0kb upstream 2000 false chr4: 2234279-2236278 Medicago truncatula
Medtr4g010130 2.0kb downstream 2.0kb downstream 5668 true chr4: 2236279-2241946 Medicago truncatula
Medtr4g010130 2.0kb downstream 2.0kb downstream 2000 false chr4: 2239947-2241946 Medicago truncatula
Medtr4g010130 5.0kb upstream 5.0kb upstream 8668 true chr4: 2231279-2239946 Medicago truncatula
Medtr4g010130 5.0kb upstream 5.0kb upstream 5000 false chr4: 2231279-2236278 Medicago truncatula
Medtr4g010130 5.0kb downstream 5.0kb downstream 8668 true chr4: 2236279-2244946 Medicago truncatula
Medtr4g010130 5.0kb downstream 5.0kb downstream 5000 false chr4: 2239947-2244946 Medicago truncatula
Medtr4g010130 10.0kb upstream 10.0kb upstream 13668 true chr4: 2226279-2239946 Medicago truncatula
Medtr4g010130 10.0kb upstream 10.0kb upstream 10000 false chr4: 2226279-2236278 Medicago truncatula
Medtr4g010130 10.0kb downstream 10.0kb downstream 13668 true chr4: 2236279-2249946 Medicago truncatula
Medtr4g010130 10.0kb downstream 10.0kb downstream 10000 false chr4: 2239947-2249946 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311033 5265 Fabidae View MSA
124067271 5270 Rosid View MSA
123738003 5271 Pentapetalae View MSA
122792522 5272 Eudicot View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.924        
cufflinks 1.115        
cufflinks 0.671        
cufflinks 0.127       Low
cufflinks 2.268       High
cufflinks 1.409        
cufflinks 1.422        
cufflinks 0.912        
cufflinks 0.61        

0 Strain