Gene : Medtr4g011230 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR23241 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED Description:  late embryogenesis abundant protein group 3 protein
Genomic Order:  368 Name:  ? Medtr4g011230
Secondary Identifier:  ? PAC:31109636
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g011230 0.5kb upstream 0.5kb upstream 1792 true chr4: 2665699-2667490 Medicago truncatula
Medtr4g011230 0.5kb upstream 0.5kb upstream 500 false chr4: 2665699-2666198 Medicago truncatula
Medtr4g011230 0.5kb downstream 0.5kb downstream 1792 true chr4: 2666199-2667990 Medicago truncatula
Medtr4g011230 0.5kb downstream 0.5kb downstream 500 false chr4: 2667491-2667990 Medicago truncatula
Medtr4g011230 1.0kb upstream 1.0kb upstream 2292 true chr4: 2665199-2667490 Medicago truncatula
Medtr4g011230 1.0kb upstream 1.0kb upstream 1000 false chr4: 2665199-2666198 Medicago truncatula
Medtr4g011230 1.0kb downstream 1.0kb downstream 2292 true chr4: 2666199-2668490 Medicago truncatula
Medtr4g011230 1.0kb downstream 1.0kb downstream 1000 false chr4: 2667491-2668490 Medicago truncatula
Medtr4g011230 2.0kb upstream 2.0kb upstream 3292 true chr4: 2664199-2667490 Medicago truncatula
Medtr4g011230 2.0kb upstream 2.0kb upstream 2000 false chr4: 2664199-2666198 Medicago truncatula
Medtr4g011230 2.0kb downstream 2.0kb downstream 3292 true chr4: 2666199-2669490 Medicago truncatula
Medtr4g011230 2.0kb downstream 2.0kb downstream 2000 false chr4: 2667491-2669490 Medicago truncatula
Medtr4g011230 5.0kb upstream 5.0kb upstream 6292 true chr4: 2661199-2667490 Medicago truncatula
Medtr4g011230 5.0kb upstream 5.0kb upstream 5000 false chr4: 2661199-2666198 Medicago truncatula
Medtr4g011230 5.0kb downstream 5.0kb downstream 6292 true chr4: 2666199-2672490 Medicago truncatula
Medtr4g011230 5.0kb downstream 5.0kb downstream 5000 false chr4: 2667491-2672490 Medicago truncatula
Medtr4g011230 10.0kb upstream 10.0kb upstream 11292 true chr4: 2656199-2667490 Medicago truncatula
Medtr4g011230 10.0kb upstream 10.0kb upstream 10000 false chr4: 2656199-2666198 Medicago truncatula
Medtr4g011230 10.0kb downstream 10.0kb downstream 11292 true chr4: 2666199-2677490 Medicago truncatula
Medtr4g011230 10.0kb downstream 10.0kb downstream 10000 false chr4: 2667491-2677490 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311666 5265 Fabidae View MSA
124063227 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.504     High  
cufflinks 4.814        
cufflinks 29.65     High High
cufflinks 1.498        
cufflinks 0.318       Low
cufflinks 18.766     High  
cufflinks 9.349        
cufflinks 9.224     High  
cufflinks 3.473        

0 Strain