Gene : Medtr3g466250 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11766 - TYROSYL-TRNA SYNTHETASE Description:  tyrosyl-tRNA synthetase
Genomic Order:  2909 Name:  ? Medtr3g466250
Secondary Identifier:  ? PAC:31057629
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g466250 0.5kb upstream 0.5kb upstream 2323 true chr3: 27230947-27233269 Medicago truncatula
Medtr3g466250 0.5kb upstream 0.5kb upstream 500 false chr3: 27230947-27231446 Medicago truncatula
Medtr3g466250 0.5kb downstream 0.5kb downstream 2323 true chr3: 27231447-27233769 Medicago truncatula
Medtr3g466250 0.5kb downstream 0.5kb downstream 500 false chr3: 27233270-27233769 Medicago truncatula
Medtr3g466250 1.0kb upstream 1.0kb upstream 2823 true chr3: 27230447-27233269 Medicago truncatula
Medtr3g466250 1.0kb upstream 1.0kb upstream 1000 false chr3: 27230447-27231446 Medicago truncatula
Medtr3g466250 1.0kb downstream 1.0kb downstream 2823 true chr3: 27231447-27234269 Medicago truncatula
Medtr3g466250 1.0kb downstream 1.0kb downstream 1000 false chr3: 27233270-27234269 Medicago truncatula
Medtr3g466250 2.0kb upstream 2.0kb upstream 3823 true chr3: 27229447-27233269 Medicago truncatula
Medtr3g466250 2.0kb upstream 2.0kb upstream 2000 false chr3: 27229447-27231446 Medicago truncatula
Medtr3g466250 2.0kb downstream 2.0kb downstream 3823 true chr3: 27231447-27235269 Medicago truncatula
Medtr3g466250 2.0kb downstream 2.0kb downstream 2000 false chr3: 27233270-27235269 Medicago truncatula
Medtr3g466250 5.0kb upstream 5.0kb upstream 6823 true chr3: 27226447-27233269 Medicago truncatula
Medtr3g466250 5.0kb upstream 5.0kb upstream 5000 false chr3: 27226447-27231446 Medicago truncatula
Medtr3g466250 5.0kb downstream 5.0kb downstream 6823 true chr3: 27231447-27238269 Medicago truncatula
Medtr3g466250 5.0kb downstream 5.0kb downstream 5000 false chr3: 27233270-27238269 Medicago truncatula
Medtr3g466250 10.0kb upstream 10.0kb upstream 11823 true chr3: 27221447-27233269 Medicago truncatula
Medtr3g466250 10.0kb upstream 10.0kb upstream 10000 false chr3: 27221447-27231446 Medicago truncatula
Medtr3g466250 10.0kb downstream 10.0kb downstream 11823 true chr3: 27231447-27243269 Medicago truncatula
Medtr3g466250 10.0kb downstream 10.0kb downstream 10000 false chr3: 27233270-27243269 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311730 5265 Fabidae View MSA
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.66        
cufflinks 4.693        
cufflinks 3.621        
cufflinks 0.926        
cufflinks 7.477       High
cufflinks 0.1     Low Low
cufflinks 2.43        
cufflinks 3.575        
cufflinks 2.03        

0 Strain