Gene : Medtr4g068290 M. truncatula Mt4.0v1

Description:  CSL zinc finger protein, putative Genomic Order:  3086
Name:  ? Medtr4g068290 Secondary Identifier:  ? PAC:31109645

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g068290 0.5kb upstream 0.5kb upstream 2452 true chr4: 25604877-25607328 Medicago truncatula
Medtr4g068290 0.5kb upstream 0.5kb upstream 500 false chr4: 25606829-25607328 Medicago truncatula
Medtr4g068290 0.5kb downstream 0.5kb downstream 2452 true chr4: 25604377-25606828 Medicago truncatula
Medtr4g068290 0.5kb downstream 0.5kb downstream 500 false chr4: 25604377-25604876 Medicago truncatula
Medtr4g068290 1.0kb upstream 1.0kb upstream 2952 true chr4: 25604877-25607828 Medicago truncatula
Medtr4g068290 1.0kb upstream 1.0kb upstream 1000 false chr4: 25606829-25607828 Medicago truncatula
Medtr4g068290 1.0kb downstream 1.0kb downstream 2952 true chr4: 25603877-25606828 Medicago truncatula
Medtr4g068290 1.0kb downstream 1.0kb downstream 1000 false chr4: 25603877-25604876 Medicago truncatula
Medtr4g068290 2.0kb upstream 2.0kb upstream 3952 true chr4: 25604877-25608828 Medicago truncatula
Medtr4g068290 2.0kb upstream 2.0kb upstream 2000 false chr4: 25606829-25608828 Medicago truncatula
Medtr4g068290 2.0kb downstream 2.0kb downstream 3952 true chr4: 25602877-25606828 Medicago truncatula
Medtr4g068290 2.0kb downstream 2.0kb downstream 2000 false chr4: 25602877-25604876 Medicago truncatula
Medtr4g068290 5.0kb upstream 5.0kb upstream 6952 true chr4: 25604877-25611828 Medicago truncatula
Medtr4g068290 5.0kb upstream 5.0kb upstream 5000 false chr4: 25606829-25611828 Medicago truncatula
Medtr4g068290 5.0kb downstream 5.0kb downstream 6952 true chr4: 25599877-25606828 Medicago truncatula
Medtr4g068290 5.0kb downstream 5.0kb downstream 5000 false chr4: 25599877-25604876 Medicago truncatula
Medtr4g068290 10.0kb upstream 10.0kb upstream 11952 true chr4: 25604877-25616828 Medicago truncatula
Medtr4g068290 10.0kb upstream 10.0kb upstream 10000 false chr4: 25606829-25616828 Medicago truncatula
Medtr4g068290 10.0kb downstream 10.0kb downstream 11952 true chr4: 25594877-25606828 Medicago truncatula
Medtr4g068290 10.0kb downstream 10.0kb downstream 10000 false chr4: 25594877-25604876 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311828 5265 Fabidae View MSA
124072814 5270 Rosid View MSA
123744407 5271 Pentapetalae View MSA
122795054 5272 Eudicot View MSA
122042892 5273 Angiosperm View MSA
121348150 5274 Embryophyte View MSA
123424463 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.482       High
cufflinks 0.007     Low Low
cufflinks 0.063     Low  
cufflinks 0.212        
cufflinks 0.024     Low  
cufflinks 0.481       High

0 Strain