Gene : Medtr4g063130 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF06136 - Domain of unknown function (DUF966) (DUF966) Description:  auxin-regulated protein
Genomic Order:  2770 Name:  ? Medtr4g063130
Secondary Identifier:  ? PAC:31113057
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g063130 0.5kb upstream 0.5kb upstream 4895 true chr4: 23360144-23365038 Medicago truncatula
Medtr4g063130 0.5kb upstream 0.5kb upstream 500 false chr4: 23360144-23360643 Medicago truncatula
Medtr4g063130 0.5kb downstream 0.5kb downstream 4895 true chr4: 23360644-23365538 Medicago truncatula
Medtr4g063130 0.5kb downstream 0.5kb downstream 500 false chr4: 23365039-23365538 Medicago truncatula
Medtr4g063130 1.0kb upstream 1.0kb upstream 5395 true chr4: 23359644-23365038 Medicago truncatula
Medtr4g063130 1.0kb upstream 1.0kb upstream 1000 false chr4: 23359644-23360643 Medicago truncatula
Medtr4g063130 1.0kb downstream 1.0kb downstream 5395 true chr4: 23360644-23366038 Medicago truncatula
Medtr4g063130 1.0kb downstream 1.0kb downstream 1000 false chr4: 23365039-23366038 Medicago truncatula
Medtr4g063130 2.0kb upstream 2.0kb upstream 6395 true chr4: 23358644-23365038 Medicago truncatula
Medtr4g063130 2.0kb upstream 2.0kb upstream 2000 false chr4: 23358644-23360643 Medicago truncatula
Medtr4g063130 2.0kb downstream 2.0kb downstream 6395 true chr4: 23360644-23367038 Medicago truncatula
Medtr4g063130 2.0kb downstream 2.0kb downstream 2000 false chr4: 23365039-23367038 Medicago truncatula
Medtr4g063130 5.0kb upstream 5.0kb upstream 9395 true chr4: 23355644-23365038 Medicago truncatula
Medtr4g063130 5.0kb upstream 5.0kb upstream 5000 false chr4: 23355644-23360643 Medicago truncatula
Medtr4g063130 5.0kb downstream 5.0kb downstream 9395 true chr4: 23360644-23370038 Medicago truncatula
Medtr4g063130 5.0kb downstream 5.0kb downstream 5000 false chr4: 23365039-23370038 Medicago truncatula
Medtr4g063130 10.0kb upstream 10.0kb upstream 14395 true chr4: 23350644-23365038 Medicago truncatula
Medtr4g063130 10.0kb upstream 10.0kb upstream 10000 false chr4: 23350644-23360643 Medicago truncatula
Medtr4g063130 10.0kb downstream 10.0kb downstream 14395 true chr4: 23360644-23375038 Medicago truncatula
Medtr4g063130 10.0kb downstream 10.0kb downstream 10000 false chr4: 23365039-23375038 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305384 5265 Fabidae View MSA
124064508 5270 Rosid View MSA
123736540 5271 Pentapetalae View MSA
122785646 5272 Eudicot View MSA
122047306 5273 Angiosperm View MSA
121350107 5274 Embryophyte View MSA
123381580 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.501        
cufflinks 1.039        
cufflinks 0.979        
cufflinks 0.718        
cufflinks 0.721        
cufflinks 0.207       Low
cufflinks 1.173        
cufflinks 0.734        
cufflinks 0.978        

0 Strain