Gene : Medtr4g063830 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Description:  E3 ubiquitin-protein ligase XBAT31-like protein
Genomic Order:  2828 Name:  ? Medtr4g063830
Secondary Identifier:  ? PAC:31108181
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g063830 0.5kb upstream 0.5kb upstream 4439 true chr4: 23711182-23715620 Medicago truncatula
Medtr4g063830 0.5kb upstream 0.5kb upstream 500 false chr4: 23711182-23711681 Medicago truncatula
Medtr4g063830 0.5kb downstream 0.5kb downstream 4439 true chr4: 23711682-23716120 Medicago truncatula
Medtr4g063830 0.5kb downstream 0.5kb downstream 500 false chr4: 23715621-23716120 Medicago truncatula
Medtr4g063830 1.0kb upstream 1.0kb upstream 4939 true chr4: 23710682-23715620 Medicago truncatula
Medtr4g063830 1.0kb upstream 1.0kb upstream 1000 false chr4: 23710682-23711681 Medicago truncatula
Medtr4g063830 1.0kb downstream 1.0kb downstream 4939 true chr4: 23711682-23716620 Medicago truncatula
Medtr4g063830 1.0kb downstream 1.0kb downstream 1000 false chr4: 23715621-23716620 Medicago truncatula
Medtr4g063830 2.0kb upstream 2.0kb upstream 5939 true chr4: 23709682-23715620 Medicago truncatula
Medtr4g063830 2.0kb upstream 2.0kb upstream 2000 false chr4: 23709682-23711681 Medicago truncatula
Medtr4g063830 2.0kb downstream 2.0kb downstream 5939 true chr4: 23711682-23717620 Medicago truncatula
Medtr4g063830 2.0kb downstream 2.0kb downstream 2000 false chr4: 23715621-23717620 Medicago truncatula
Medtr4g063830 5.0kb upstream 5.0kb upstream 8939 true chr4: 23706682-23715620 Medicago truncatula
Medtr4g063830 5.0kb upstream 5.0kb upstream 5000 false chr4: 23706682-23711681 Medicago truncatula
Medtr4g063830 5.0kb downstream 5.0kb downstream 8939 true chr4: 23711682-23720620 Medicago truncatula
Medtr4g063830 5.0kb downstream 5.0kb downstream 5000 false chr4: 23715621-23720620 Medicago truncatula
Medtr4g063830 10.0kb upstream 10.0kb upstream 13939 true chr4: 23701682-23715620 Medicago truncatula
Medtr4g063830 10.0kb upstream 10.0kb upstream 10000 false chr4: 23701682-23711681 Medicago truncatula
Medtr4g063830 10.0kb downstream 10.0kb downstream 13939 true chr4: 23711682-23725620 Medicago truncatula
Medtr4g063830 10.0kb downstream 10.0kb downstream 10000 false chr4: 23715621-23725620 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310561 5265 Fabidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.381        
cufflinks 2.136        
cufflinks 2.316        
cufflinks 1.501        
cufflinks 2.529        
cufflinks 0.916       Low
cufflinks 2.572        
cufflinks 1.387        
cufflinks 3.097       High

0 Strain