Gene : Medtr4g060540 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Description:  proteasome subunit beta protein
Genomic Order:  2644 Name:  ? Medtr4g060540
Secondary Identifier:  ? PAC:31111527
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g060540 0.5kb upstream 0.5kb upstream 5092 true chr4: 22272835-22277926 Medicago truncatula
Medtr4g060540 0.5kb upstream 0.5kb upstream 500 false chr4: 22272835-22273334 Medicago truncatula
Medtr4g060540 0.5kb downstream 0.5kb downstream 5092 true chr4: 22273335-22278426 Medicago truncatula
Medtr4g060540 0.5kb downstream 0.5kb downstream 500 false chr4: 22277927-22278426 Medicago truncatula
Medtr4g060540 1.0kb upstream 1.0kb upstream 5592 true chr4: 22272335-22277926 Medicago truncatula
Medtr4g060540 1.0kb upstream 1.0kb upstream 1000 false chr4: 22272335-22273334 Medicago truncatula
Medtr4g060540 1.0kb downstream 1.0kb downstream 5592 true chr4: 22273335-22278926 Medicago truncatula
Medtr4g060540 1.0kb downstream 1.0kb downstream 1000 false chr4: 22277927-22278926 Medicago truncatula
Medtr4g060540 2.0kb upstream 2.0kb upstream 6592 true chr4: 22271335-22277926 Medicago truncatula
Medtr4g060540 2.0kb upstream 2.0kb upstream 2000 false chr4: 22271335-22273334 Medicago truncatula
Medtr4g060540 2.0kb downstream 2.0kb downstream 6592 true chr4: 22273335-22279926 Medicago truncatula
Medtr4g060540 2.0kb downstream 2.0kb downstream 2000 false chr4: 22277927-22279926 Medicago truncatula
Medtr4g060540 5.0kb upstream 5.0kb upstream 9592 true chr4: 22268335-22277926 Medicago truncatula
Medtr4g060540 5.0kb upstream 5.0kb upstream 5000 false chr4: 22268335-22273334 Medicago truncatula
Medtr4g060540 5.0kb downstream 5.0kb downstream 9592 true chr4: 22273335-22282926 Medicago truncatula
Medtr4g060540 5.0kb downstream 5.0kb downstream 5000 false chr4: 22277927-22282926 Medicago truncatula
Medtr4g060540 10.0kb upstream 10.0kb upstream 14592 true chr4: 22263335-22277926 Medicago truncatula
Medtr4g060540 10.0kb upstream 10.0kb upstream 10000 false chr4: 22263335-22273334 Medicago truncatula
Medtr4g060540 10.0kb downstream 10.0kb downstream 14592 true chr4: 22273335-22287926 Medicago truncatula
Medtr4g060540 10.0kb downstream 10.0kb downstream 10000 false chr4: 22277927-22287926 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311844 5265 Fabidae View MSA
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.065        
cufflinks 3.581        
cufflinks 3.162       Low
cufflinks 5.978        
cufflinks 4.141        
cufflinks 3.115       Low
cufflinks 5.275        
cufflinks 3.552        
cufflinks 8.27       High

0 Strain