Gene : Medtr4g050880 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR35325:SF1 - PHOTOSYSTEM II REACTION CENTER PROTEIN K Description:  photosystem II reaction center protein K
Genomic Order:  2110 Name:  ? Medtr4g050880
Secondary Identifier:  ? PAC:31108142
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g050880 0.5kb upstream 0.5kb upstream 1015 true chr4: 18063033-18064047 Medicago truncatula
Medtr4g050880 0.5kb upstream 0.5kb upstream 500 false chr4: 18063033-18063532 Medicago truncatula
Medtr4g050880 0.5kb downstream 0.5kb downstream 1015 true chr4: 18063533-18064547 Medicago truncatula
Medtr4g050880 0.5kb downstream 0.5kb downstream 500 false chr4: 18064048-18064547 Medicago truncatula
Medtr4g050880 1.0kb upstream 1.0kb upstream 1515 true chr4: 18062533-18064047 Medicago truncatula
Medtr4g050880 1.0kb upstream 1.0kb upstream 1000 false chr4: 18062533-18063532 Medicago truncatula
Medtr4g050880 1.0kb downstream 1.0kb downstream 1515 true chr4: 18063533-18065047 Medicago truncatula
Medtr4g050880 1.0kb downstream 1.0kb downstream 1000 false chr4: 18064048-18065047 Medicago truncatula
Medtr4g050880 2.0kb upstream 2.0kb upstream 2515 true chr4: 18061533-18064047 Medicago truncatula
Medtr4g050880 2.0kb upstream 2.0kb upstream 2000 false chr4: 18061533-18063532 Medicago truncatula
Medtr4g050880 2.0kb downstream 2.0kb downstream 2515 true chr4: 18063533-18066047 Medicago truncatula
Medtr4g050880 2.0kb downstream 2.0kb downstream 2000 false chr4: 18064048-18066047 Medicago truncatula
Medtr4g050880 5.0kb upstream 5.0kb upstream 5515 true chr4: 18058533-18064047 Medicago truncatula
Medtr4g050880 5.0kb upstream 5.0kb upstream 5000 false chr4: 18058533-18063532 Medicago truncatula
Medtr4g050880 5.0kb downstream 5.0kb downstream 5515 true chr4: 18063533-18069047 Medicago truncatula
Medtr4g050880 5.0kb downstream 5.0kb downstream 5000 false chr4: 18064048-18069047 Medicago truncatula
Medtr4g050880 10.0kb upstream 10.0kb upstream 10515 true chr4: 18053533-18064047 Medicago truncatula
Medtr4g050880 10.0kb upstream 10.0kb upstream 10000 false chr4: 18053533-18063532 Medicago truncatula
Medtr4g050880 10.0kb downstream 10.0kb downstream 10515 true chr4: 18063533-18074047 Medicago truncatula
Medtr4g050880 10.0kb downstream 10.0kb downstream 10000 false chr4: 18064048-18074047 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027256 5273 Angiosperm View MSA
122313847 5265 Fabidae View MSA
124037971 5270 Rosid View MSA
123744134 5271 Pentapetalae View MSA
122797733 5272 Eudicot View MSA
121296936 5274 Embryophyte View MSA
123426665 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.215        
cufflinks 7.925        
cufflinks 9.075        
cufflinks 1.095       Low
cufflinks 6.561        
cufflinks 12.584     High High
cufflinks 3.893        
cufflinks 6.482        
cufflinks 3.007        

0 Strain