Gene : Medtr4g051103 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG4665 - ATP synthase F0 subunit 6 and related proteins Description:  F0F1-type ATP synthase, subunit A
Genomic Order:  2121 Name:  ? Medtr4g051103
Secondary Identifier:  ? PAC:31106743
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6126 Medicago truncatula pathologic  
Mtruncatula PWY-7219 Medicago truncatula pathologic  
Mtruncatula PWY-7229 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g051103 0.5kb upstream 0.5kb upstream 1364 true chr4: 18143552-18144915 Medicago truncatula
Medtr4g051103 0.5kb upstream 0.5kb upstream 500 false chr4: 18144416-18144915 Medicago truncatula
Medtr4g051103 0.5kb downstream 0.5kb downstream 1364 true chr4: 18143052-18144415 Medicago truncatula
Medtr4g051103 0.5kb downstream 0.5kb downstream 500 false chr4: 18143052-18143551 Medicago truncatula
Medtr4g051103 1.0kb upstream 1.0kb upstream 1864 true chr4: 18143552-18145415 Medicago truncatula
Medtr4g051103 1.0kb upstream 1.0kb upstream 1000 false chr4: 18144416-18145415 Medicago truncatula
Medtr4g051103 1.0kb downstream 1.0kb downstream 1864 true chr4: 18142552-18144415 Medicago truncatula
Medtr4g051103 1.0kb downstream 1.0kb downstream 1000 false chr4: 18142552-18143551 Medicago truncatula
Medtr4g051103 2.0kb upstream 2.0kb upstream 2864 true chr4: 18143552-18146415 Medicago truncatula
Medtr4g051103 2.0kb upstream 2.0kb upstream 2000 false chr4: 18144416-18146415 Medicago truncatula
Medtr4g051103 2.0kb downstream 2.0kb downstream 2864 true chr4: 18141552-18144415 Medicago truncatula
Medtr4g051103 2.0kb downstream 2.0kb downstream 2000 false chr4: 18141552-18143551 Medicago truncatula
Medtr4g051103 5.0kb upstream 5.0kb upstream 5864 true chr4: 18143552-18149415 Medicago truncatula
Medtr4g051103 5.0kb upstream 5.0kb upstream 5000 false chr4: 18144416-18149415 Medicago truncatula
Medtr4g051103 5.0kb downstream 5.0kb downstream 5864 true chr4: 18138552-18144415 Medicago truncatula
Medtr4g051103 5.0kb downstream 5.0kb downstream 5000 false chr4: 18138552-18143551 Medicago truncatula
Medtr4g051103 10.0kb upstream 10.0kb upstream 10864 true chr4: 18143552-18154415 Medicago truncatula
Medtr4g051103 10.0kb upstream 10.0kb upstream 10000 false chr4: 18144416-18154415 Medicago truncatula
Medtr4g051103 10.0kb downstream 10.0kb downstream 10864 true chr4: 18133552-18144415 Medicago truncatula
Medtr4g051103 10.0kb downstream 10.0kb downstream 10000 false chr4: 18133552-18143551 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
122296410 5265 Fabidae View MSA
124037895 5270 Rosid View MSA
123752003 5271 Pentapetalae View MSA
122795153 5272 Eudicot View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.524        
cufflinks 4.799        
cufflinks 5.831        
cufflinks 0.082       Low
cufflinks 4.231        
cufflinks 1.317        
cufflinks 0.231        
cufflinks 4.811        
cufflinks 0.042     Low Low

0 Strain