Gene : Medtr4g057040 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3484 - Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins Description:  cyclin-dependent kinase regulatory subunit
Genomic Order:  2457 Name:  ? Medtr4g057040
Secondary Identifier:  ? PAC:31113043
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g057040 0.5kb upstream 0.5kb upstream 3493 true chr4: 20850888-20854380 Medicago truncatula
Medtr4g057040 0.5kb upstream 0.5kb upstream 500 false chr4: 20850888-20851387 Medicago truncatula
Medtr4g057040 0.5kb downstream 0.5kb downstream 3493 true chr4: 20851388-20854880 Medicago truncatula
Medtr4g057040 0.5kb downstream 0.5kb downstream 500 false chr4: 20854381-20854880 Medicago truncatula
Medtr4g057040 1.0kb upstream 1.0kb upstream 3993 true chr4: 20850388-20854380 Medicago truncatula
Medtr4g057040 1.0kb upstream 1.0kb upstream 1000 false chr4: 20850388-20851387 Medicago truncatula
Medtr4g057040 1.0kb downstream 1.0kb downstream 3993 true chr4: 20851388-20855380 Medicago truncatula
Medtr4g057040 1.0kb downstream 1.0kb downstream 1000 false chr4: 20854381-20855380 Medicago truncatula
Medtr4g057040 2.0kb upstream 2.0kb upstream 4993 true chr4: 20849388-20854380 Medicago truncatula
Medtr4g057040 2.0kb upstream 2.0kb upstream 2000 false chr4: 20849388-20851387 Medicago truncatula
Medtr4g057040 2.0kb downstream 2.0kb downstream 4993 true chr4: 20851388-20856380 Medicago truncatula
Medtr4g057040 2.0kb downstream 2.0kb downstream 2000 false chr4: 20854381-20856380 Medicago truncatula
Medtr4g057040 5.0kb upstream 5.0kb upstream 7993 true chr4: 20846388-20854380 Medicago truncatula
Medtr4g057040 5.0kb upstream 5.0kb upstream 5000 false chr4: 20846388-20851387 Medicago truncatula
Medtr4g057040 5.0kb downstream 5.0kb downstream 7993 true chr4: 20851388-20859380 Medicago truncatula
Medtr4g057040 5.0kb downstream 5.0kb downstream 5000 false chr4: 20854381-20859380 Medicago truncatula
Medtr4g057040 10.0kb upstream 10.0kb upstream 12993 true chr4: 20841388-20854380 Medicago truncatula
Medtr4g057040 10.0kb upstream 10.0kb upstream 10000 false chr4: 20841388-20851387 Medicago truncatula
Medtr4g057040 10.0kb downstream 10.0kb downstream 12993 true chr4: 20851388-20864380 Medicago truncatula
Medtr4g057040 10.0kb downstream 10.0kb downstream 10000 false chr4: 20854381-20864380 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304336 5265 Fabidae View MSA
124061080 5270 Rosid View MSA
123739192 5271 Pentapetalae View MSA
122791805 5272 Eudicot View MSA
122049124 5273 Angiosperm View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.677       Low
cufflinks 5.869        
cufflinks 6.964        
cufflinks 17.171     High High
cufflinks 8.352        
cufflinks 15.945     High High
cufflinks 7.599        
cufflinks 6.264        
cufflinks 19.097     High High

0 Strain