Gene : Medtr4g025900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31675:SF0 - AXIAL REGULATOR YABBY 1-RELATED Description:  plant-specific transcription factor YABBY family protein
Genomic Order:  1153 Name:  ? Medtr4g025900
Secondary Identifier:  ? PAC:31113645
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g025900 0.5kb upstream 0.5kb upstream 3449 true chr4: 8885104-8888552 Medicago truncatula
Medtr4g025900 0.5kb upstream 0.5kb upstream 500 false chr4: 8885104-8885603 Medicago truncatula
Medtr4g025900 0.5kb downstream 0.5kb downstream 3449 true chr4: 8885604-8889052 Medicago truncatula
Medtr4g025900 0.5kb downstream 0.5kb downstream 500 false chr4: 8888553-8889052 Medicago truncatula
Medtr4g025900 1.0kb upstream 1.0kb upstream 3949 true chr4: 8884604-8888552 Medicago truncatula
Medtr4g025900 1.0kb upstream 1.0kb upstream 1000 false chr4: 8884604-8885603 Medicago truncatula
Medtr4g025900 1.0kb downstream 1.0kb downstream 3949 true chr4: 8885604-8889552 Medicago truncatula
Medtr4g025900 1.0kb downstream 1.0kb downstream 1000 false chr4: 8888553-8889552 Medicago truncatula
Medtr4g025900 2.0kb upstream 2.0kb upstream 4949 true chr4: 8883604-8888552 Medicago truncatula
Medtr4g025900 2.0kb upstream 2.0kb upstream 2000 false chr4: 8883604-8885603 Medicago truncatula
Medtr4g025900 2.0kb downstream 2.0kb downstream 4949 true chr4: 8885604-8890552 Medicago truncatula
Medtr4g025900 2.0kb downstream 2.0kb downstream 2000 false chr4: 8888553-8890552 Medicago truncatula
Medtr4g025900 5.0kb upstream 5.0kb upstream 7949 true chr4: 8880604-8888552 Medicago truncatula
Medtr4g025900 5.0kb upstream 5.0kb upstream 5000 false chr4: 8880604-8885603 Medicago truncatula
Medtr4g025900 5.0kb downstream 5.0kb downstream 7949 true chr4: 8885604-8893552 Medicago truncatula
Medtr4g025900 5.0kb downstream 5.0kb downstream 5000 false chr4: 8888553-8893552 Medicago truncatula
Medtr4g025900 10.0kb upstream 10.0kb upstream 12949 true chr4: 8875604-8888552 Medicago truncatula
Medtr4g025900 10.0kb upstream 10.0kb upstream 10000 false chr4: 8875604-8885603 Medicago truncatula
Medtr4g025900 10.0kb downstream 10.0kb downstream 12949 true chr4: 8885604-8898552 Medicago truncatula
Medtr4g025900 10.0kb downstream 10.0kb downstream 10000 false chr4: 8888553-8898552 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306554 5265 Fabidae View MSA
124070800 5270 Rosid View MSA
123746841 5271 Pentapetalae View MSA
122797230 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.917        
cufflinks 3.86        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.924        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.713        
cufflinks 0.023     Low Low

0 Strain