Gene : Medtr4g036090 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Description:  trehalose-phosphate phosphatase
Genomic Order:  1634 Name:  ? Medtr4g036090
Secondary Identifier:  ? PAC:31114873
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g036090 0.5kb upstream 0.5kb upstream 6743 true chr4: 12905852-12912594 Medicago truncatula
Medtr4g036090 0.5kb upstream 0.5kb upstream 500 false chr4: 12912095-12912594 Medicago truncatula
Medtr4g036090 0.5kb downstream 0.5kb downstream 6743 true chr4: 12905352-12912094 Medicago truncatula
Medtr4g036090 0.5kb downstream 0.5kb downstream 500 false chr4: 12905352-12905851 Medicago truncatula
Medtr4g036090 1.0kb upstream 1.0kb upstream 7243 true chr4: 12905852-12913094 Medicago truncatula
Medtr4g036090 1.0kb upstream 1.0kb upstream 1000 false chr4: 12912095-12913094 Medicago truncatula
Medtr4g036090 1.0kb downstream 1.0kb downstream 7243 true chr4: 12904852-12912094 Medicago truncatula
Medtr4g036090 1.0kb downstream 1.0kb downstream 1000 false chr4: 12904852-12905851 Medicago truncatula
Medtr4g036090 2.0kb upstream 2.0kb upstream 8243 true chr4: 12905852-12914094 Medicago truncatula
Medtr4g036090 2.0kb upstream 2.0kb upstream 2000 false chr4: 12912095-12914094 Medicago truncatula
Medtr4g036090 2.0kb downstream 2.0kb downstream 8243 true chr4: 12903852-12912094 Medicago truncatula
Medtr4g036090 2.0kb downstream 2.0kb downstream 2000 false chr4: 12903852-12905851 Medicago truncatula
Medtr4g036090 5.0kb upstream 5.0kb upstream 11243 true chr4: 12905852-12917094 Medicago truncatula
Medtr4g036090 5.0kb upstream 5.0kb upstream 5000 false chr4: 12912095-12917094 Medicago truncatula
Medtr4g036090 5.0kb downstream 5.0kb downstream 11243 true chr4: 12900852-12912094 Medicago truncatula
Medtr4g036090 5.0kb downstream 5.0kb downstream 5000 false chr4: 12900852-12905851 Medicago truncatula
Medtr4g036090 10.0kb upstream 10.0kb upstream 16243 true chr4: 12905852-12922094 Medicago truncatula
Medtr4g036090 10.0kb upstream 10.0kb upstream 10000 false chr4: 12912095-12922094 Medicago truncatula
Medtr4g036090 10.0kb downstream 10.0kb downstream 16243 true chr4: 12895852-12912094 Medicago truncatula
Medtr4g036090 10.0kb downstream 10.0kb downstream 10000 false chr4: 12895852-12905851 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304944 5265 Fabidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.002       High
cufflinks 1.492        
cufflinks 1.308        
cufflinks 0.538       Low
cufflinks 0.992        
cufflinks 1.507        
cufflinks 3.987       High
cufflinks 0.783        
cufflinks 2.496        

0 Strain