Gene : Medtr4g035905 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31080:SF19 - PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Description:  plant invertase/pectin methylesterase inhibitor
Genomic Order:  1616 Name:  ? Medtr4g035905
Secondary Identifier:  ? PAC:31106704
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g035905 0.5kb upstream 0.5kb upstream 1393 true chr4: 12710398-12711790 Medicago truncatula
Medtr4g035905 0.5kb upstream 0.5kb upstream 500 false chr4: 12711291-12711790 Medicago truncatula
Medtr4g035905 0.5kb downstream 0.5kb downstream 1393 true chr4: 12709898-12711290 Medicago truncatula
Medtr4g035905 0.5kb downstream 0.5kb downstream 500 false chr4: 12709898-12710397 Medicago truncatula
Medtr4g035905 1.0kb upstream 1.0kb upstream 1893 true chr4: 12710398-12712290 Medicago truncatula
Medtr4g035905 1.0kb upstream 1.0kb upstream 1000 false chr4: 12711291-12712290 Medicago truncatula
Medtr4g035905 1.0kb downstream 1.0kb downstream 1893 true chr4: 12709398-12711290 Medicago truncatula
Medtr4g035905 1.0kb downstream 1.0kb downstream 1000 false chr4: 12709398-12710397 Medicago truncatula
Medtr4g035905 2.0kb upstream 2.0kb upstream 2893 true chr4: 12710398-12713290 Medicago truncatula
Medtr4g035905 2.0kb upstream 2.0kb upstream 2000 false chr4: 12711291-12713290 Medicago truncatula
Medtr4g035905 2.0kb downstream 2.0kb downstream 2893 true chr4: 12708398-12711290 Medicago truncatula
Medtr4g035905 2.0kb downstream 2.0kb downstream 2000 false chr4: 12708398-12710397 Medicago truncatula
Medtr4g035905 5.0kb upstream 5.0kb upstream 5893 true chr4: 12710398-12716290 Medicago truncatula
Medtr4g035905 5.0kb upstream 5.0kb upstream 5000 false chr4: 12711291-12716290 Medicago truncatula
Medtr4g035905 5.0kb downstream 5.0kb downstream 5893 true chr4: 12705398-12711290 Medicago truncatula
Medtr4g035905 5.0kb downstream 5.0kb downstream 5000 false chr4: 12705398-12710397 Medicago truncatula
Medtr4g035905 10.0kb upstream 10.0kb upstream 10893 true chr4: 12710398-12721290 Medicago truncatula
Medtr4g035905 10.0kb upstream 10.0kb upstream 10000 false chr4: 12711291-12721290 Medicago truncatula
Medtr4g035905 10.0kb downstream 10.0kb downstream 10893 true chr4: 12700398-12711290 Medicago truncatula
Medtr4g035905 10.0kb downstream 10.0kb downstream 10000 false chr4: 12700398-12710397 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306375 5265 Fabidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.926        
cufflinks 1228.89     High  
cufflinks 1577.23     High High
cufflinks 0.743        
cufflinks 1711.76     High High
cufflinks 1.548        
cufflinks 0.552        
cufflinks 1311.315     High High
cufflinks 0.101       Low

0 Strain