Gene : Medtr4g045997 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00070//PF13202 - Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox) // EF hand (EF-hand_5) Description:  NAD(P)H dehydrogenase B2
Genomic Order:  1908 Name:  ? Medtr4g045997
Secondary Identifier:  ? PAC:31109812
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7279 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g045997 0.5kb upstream 0.5kb upstream 6153 true chr4: 16013268-16019420 Medicago truncatula
Medtr4g045997 0.5kb upstream 0.5kb upstream 500 false chr4: 16018921-16019420 Medicago truncatula
Medtr4g045997 0.5kb downstream 0.5kb downstream 6153 true chr4: 16012768-16018920 Medicago truncatula
Medtr4g045997 0.5kb downstream 0.5kb downstream 500 false chr4: 16012768-16013267 Medicago truncatula
Medtr4g045997 1.0kb upstream 1.0kb upstream 6653 true chr4: 16013268-16019920 Medicago truncatula
Medtr4g045997 1.0kb upstream 1.0kb upstream 1000 false chr4: 16018921-16019920 Medicago truncatula
Medtr4g045997 1.0kb downstream 1.0kb downstream 6653 true chr4: 16012268-16018920 Medicago truncatula
Medtr4g045997 1.0kb downstream 1.0kb downstream 1000 false chr4: 16012268-16013267 Medicago truncatula
Medtr4g045997 2.0kb upstream 2.0kb upstream 7653 true chr4: 16013268-16020920 Medicago truncatula
Medtr4g045997 2.0kb upstream 2.0kb upstream 2000 false chr4: 16018921-16020920 Medicago truncatula
Medtr4g045997 2.0kb downstream 2.0kb downstream 7653 true chr4: 16011268-16018920 Medicago truncatula
Medtr4g045997 2.0kb downstream 2.0kb downstream 2000 false chr4: 16011268-16013267 Medicago truncatula
Medtr4g045997 5.0kb upstream 5.0kb upstream 10653 true chr4: 16013268-16023920 Medicago truncatula
Medtr4g045997 5.0kb upstream 5.0kb upstream 5000 false chr4: 16018921-16023920 Medicago truncatula
Medtr4g045997 5.0kb downstream 5.0kb downstream 10653 true chr4: 16008268-16018920 Medicago truncatula
Medtr4g045997 5.0kb downstream 5.0kb downstream 5000 false chr4: 16008268-16013267 Medicago truncatula
Medtr4g045997 10.0kb upstream 10.0kb upstream 15653 true chr4: 16013268-16028920 Medicago truncatula
Medtr4g045997 10.0kb upstream 10.0kb upstream 10000 false chr4: 16018921-16028920 Medicago truncatula
Medtr4g045997 10.0kb downstream 10.0kb downstream 15653 true chr4: 16003268-16018920 Medicago truncatula
Medtr4g045997 10.0kb downstream 10.0kb downstream 10000 false chr4: 16003268-16013267 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306603 5265 Fabidae View MSA
124065311 5270 Rosid View MSA
123739176 5271 Pentapetalae View MSA
122786573 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.129        
cufflinks 1.211        
cufflinks 1.328        
cufflinks 0.782       Low
cufflinks 1.454        
cufflinks 0.659       Low
cufflinks 2.198       High
cufflinks 0.896        
cufflinks 2.64       High

0 Strain