Gene : Medtr4g036265 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12866:SF2 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 Description:  autophagy 3 (APG3) protein
Genomic Order:  1643 Name:  ? Medtr4g036265
Secondary Identifier:  ? PAC:31111239
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g036265 0.5kb upstream 0.5kb upstream 5557 true chr4: 13051745-13057301 Medicago truncatula
Medtr4g036265 0.5kb upstream 0.5kb upstream 500 false chr4: 13051745-13052244 Medicago truncatula
Medtr4g036265 0.5kb downstream 0.5kb downstream 5557 true chr4: 13052245-13057801 Medicago truncatula
Medtr4g036265 0.5kb downstream 0.5kb downstream 500 false chr4: 13057302-13057801 Medicago truncatula
Medtr4g036265 1.0kb upstream 1.0kb upstream 6057 true chr4: 13051245-13057301 Medicago truncatula
Medtr4g036265 1.0kb upstream 1.0kb upstream 1000 false chr4: 13051245-13052244 Medicago truncatula
Medtr4g036265 1.0kb downstream 1.0kb downstream 6057 true chr4: 13052245-13058301 Medicago truncatula
Medtr4g036265 1.0kb downstream 1.0kb downstream 1000 false chr4: 13057302-13058301 Medicago truncatula
Medtr4g036265 2.0kb upstream 2.0kb upstream 7057 true chr4: 13050245-13057301 Medicago truncatula
Medtr4g036265 2.0kb upstream 2.0kb upstream 2000 false chr4: 13050245-13052244 Medicago truncatula
Medtr4g036265 2.0kb downstream 2.0kb downstream 7057 true chr4: 13052245-13059301 Medicago truncatula
Medtr4g036265 2.0kb downstream 2.0kb downstream 2000 false chr4: 13057302-13059301 Medicago truncatula
Medtr4g036265 5.0kb upstream 5.0kb upstream 10057 true chr4: 13047245-13057301 Medicago truncatula
Medtr4g036265 5.0kb upstream 5.0kb upstream 5000 false chr4: 13047245-13052244 Medicago truncatula
Medtr4g036265 5.0kb downstream 5.0kb downstream 10057 true chr4: 13052245-13062301 Medicago truncatula
Medtr4g036265 5.0kb downstream 5.0kb downstream 5000 false chr4: 13057302-13062301 Medicago truncatula
Medtr4g036265 10.0kb upstream 10.0kb upstream 15057 true chr4: 13042245-13057301 Medicago truncatula
Medtr4g036265 10.0kb upstream 10.0kb upstream 10000 false chr4: 13042245-13052244 Medicago truncatula
Medtr4g036265 10.0kb downstream 10.0kb downstream 15057 true chr4: 13052245-13067301 Medicago truncatula
Medtr4g036265 10.0kb downstream 10.0kb downstream 10000 false chr4: 13057302-13067301 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299719 5265 Fabidae View MSA
124064028 5270 Rosid View MSA
123743996 5271 Pentapetalae View MSA
122789041 5272 Eudicot View MSA
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.607       High
cufflinks 2.961        
cufflinks 3.769       High
cufflinks 1.672       Low
cufflinks 2.852        
cufflinks 1.646       Low
cufflinks 2.772        
cufflinks 3.166        
cufflinks 1.799       Low

0 Strain