Gene : Medtr4g037750 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4392 - RNA polymerase, subunit L Description:  DNA-directed RNA polymerase II subunit RPB11-like protein
Genomic Order:  1743 Name:  ? Medtr4g037750
Secondary Identifier:  ? PAC:31106717
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g037750 0.5kb upstream 0.5kb upstream 3046 true chr4: 13948441-13951486 Medicago truncatula
Medtr4g037750 0.5kb upstream 0.5kb upstream 500 false chr4: 13948441-13948940 Medicago truncatula
Medtr4g037750 0.5kb downstream 0.5kb downstream 3046 true chr4: 13948941-13951986 Medicago truncatula
Medtr4g037750 0.5kb downstream 0.5kb downstream 500 false chr4: 13951487-13951986 Medicago truncatula
Medtr4g037750 1.0kb upstream 1.0kb upstream 3546 true chr4: 13947941-13951486 Medicago truncatula
Medtr4g037750 1.0kb upstream 1.0kb upstream 1000 false chr4: 13947941-13948940 Medicago truncatula
Medtr4g037750 1.0kb downstream 1.0kb downstream 3546 true chr4: 13948941-13952486 Medicago truncatula
Medtr4g037750 1.0kb downstream 1.0kb downstream 1000 false chr4: 13951487-13952486 Medicago truncatula
Medtr4g037750 2.0kb upstream 2.0kb upstream 4546 true chr4: 13946941-13951486 Medicago truncatula
Medtr4g037750 2.0kb upstream 2.0kb upstream 2000 false chr4: 13946941-13948940 Medicago truncatula
Medtr4g037750 2.0kb downstream 2.0kb downstream 4546 true chr4: 13948941-13953486 Medicago truncatula
Medtr4g037750 2.0kb downstream 2.0kb downstream 2000 false chr4: 13951487-13953486 Medicago truncatula
Medtr4g037750 5.0kb upstream 5.0kb upstream 7546 true chr4: 13943941-13951486 Medicago truncatula
Medtr4g037750 5.0kb upstream 5.0kb upstream 5000 false chr4: 13943941-13948940 Medicago truncatula
Medtr4g037750 5.0kb downstream 5.0kb downstream 7546 true chr4: 13948941-13956486 Medicago truncatula
Medtr4g037750 5.0kb downstream 5.0kb downstream 5000 false chr4: 13951487-13956486 Medicago truncatula
Medtr4g037750 10.0kb upstream 10.0kb upstream 12546 true chr4: 13938941-13951486 Medicago truncatula
Medtr4g037750 10.0kb upstream 10.0kb upstream 10000 false chr4: 13938941-13948940 Medicago truncatula
Medtr4g037750 10.0kb downstream 10.0kb downstream 12546 true chr4: 13948941-13961486 Medicago truncatula
Medtr4g037750 10.0kb downstream 10.0kb downstream 10000 false chr4: 13951487-13961486 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300598 5265 Fabidae View MSA
124064272 5270 Rosid View MSA
123749269 5271 Pentapetalae View MSA
122790811 5272 Eudicot View MSA
122043921 5273 Angiosperm View MSA
121349469 5274 Embryophyte View MSA
123424853 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.758        
cufflinks 3.671        
cufflinks 3.496        
cufflinks 2.103        
cufflinks 5.156        
cufflinks 0.941       Low
cufflinks 3.714        
cufflinks 3.178        
cufflinks 4.225        

0 Strain