Gene : Medtr4g052000 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12081//PTHR12081:SF47 - TRANSCRIPTION FACTOR E2F Description:  E2F transcription factor
Genomic Order:  2220 Name:  ? Medtr4g052000
Secondary Identifier:  ? PAC:31113005
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g052000 0.5kb upstream 0.5kb upstream 6582 true chr4: 18813710-18820291 Medicago truncatula
Medtr4g052000 0.5kb upstream 0.5kb upstream 500 false chr4: 18813710-18814209 Medicago truncatula
Medtr4g052000 0.5kb downstream 0.5kb downstream 6582 true chr4: 18814210-18820791 Medicago truncatula
Medtr4g052000 0.5kb downstream 0.5kb downstream 500 false chr4: 18820292-18820791 Medicago truncatula
Medtr4g052000 1.0kb upstream 1.0kb upstream 7082 true chr4: 18813210-18820291 Medicago truncatula
Medtr4g052000 1.0kb upstream 1.0kb upstream 1000 false chr4: 18813210-18814209 Medicago truncatula
Medtr4g052000 1.0kb downstream 1.0kb downstream 7082 true chr4: 18814210-18821291 Medicago truncatula
Medtr4g052000 1.0kb downstream 1.0kb downstream 1000 false chr4: 18820292-18821291 Medicago truncatula
Medtr4g052000 2.0kb upstream 2.0kb upstream 8082 true chr4: 18812210-18820291 Medicago truncatula
Medtr4g052000 2.0kb upstream 2.0kb upstream 2000 false chr4: 18812210-18814209 Medicago truncatula
Medtr4g052000 2.0kb downstream 2.0kb downstream 8082 true chr4: 18814210-18822291 Medicago truncatula
Medtr4g052000 2.0kb downstream 2.0kb downstream 2000 false chr4: 18820292-18822291 Medicago truncatula
Medtr4g052000 5.0kb upstream 5.0kb upstream 11082 true chr4: 18809210-18820291 Medicago truncatula
Medtr4g052000 5.0kb upstream 5.0kb upstream 5000 false chr4: 18809210-18814209 Medicago truncatula
Medtr4g052000 5.0kb downstream 5.0kb downstream 11082 true chr4: 18814210-18825291 Medicago truncatula
Medtr4g052000 5.0kb downstream 5.0kb downstream 5000 false chr4: 18820292-18825291 Medicago truncatula
Medtr4g052000 10.0kb upstream 10.0kb upstream 16082 true chr4: 18804210-18820291 Medicago truncatula
Medtr4g052000 10.0kb upstream 10.0kb upstream 10000 false chr4: 18804210-18814209 Medicago truncatula
Medtr4g052000 10.0kb downstream 10.0kb downstream 16082 true chr4: 18814210-18830291 Medicago truncatula
Medtr4g052000 10.0kb downstream 10.0kb downstream 10000 false chr4: 18820292-18830291 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304266 5265 Fabidae View MSA
124067172 5270 Rosid View MSA
123739560 5271 Pentapetalae View MSA
122789212 5272 Eudicot View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.393        
cufflinks 3.311        
cufflinks 7.366       High
cufflinks 3.873        
cufflinks 3.0        
cufflinks 1.907       Low
cufflinks 3.942        
cufflinks 4.966        
cufflinks 3.931        

0 Strain