Gene : Medtr4g047870 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Description:  septum-promoting GTP-binding-like protein
Genomic Order:  1986 Name:  ? Medtr4g047870
Secondary Identifier:  ? PAC:31110240
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g047870 0.5kb upstream 0.5kb upstream 4951 true chr4: 16882915-16887865 Medicago truncatula
Medtr4g047870 0.5kb upstream 0.5kb upstream 500 false chr4: 16887366-16887865 Medicago truncatula
Medtr4g047870 0.5kb downstream 0.5kb downstream 4951 true chr4: 16882415-16887365 Medicago truncatula
Medtr4g047870 0.5kb downstream 0.5kb downstream 500 false chr4: 16882415-16882914 Medicago truncatula
Medtr4g047870 1.0kb upstream 1.0kb upstream 5451 true chr4: 16882915-16888365 Medicago truncatula
Medtr4g047870 1.0kb upstream 1.0kb upstream 1000 false chr4: 16887366-16888365 Medicago truncatula
Medtr4g047870 1.0kb downstream 1.0kb downstream 5451 true chr4: 16881915-16887365 Medicago truncatula
Medtr4g047870 1.0kb downstream 1.0kb downstream 1000 false chr4: 16881915-16882914 Medicago truncatula
Medtr4g047870 2.0kb upstream 2.0kb upstream 6451 true chr4: 16882915-16889365 Medicago truncatula
Medtr4g047870 2.0kb upstream 2.0kb upstream 2000 false chr4: 16887366-16889365 Medicago truncatula
Medtr4g047870 2.0kb downstream 2.0kb downstream 6451 true chr4: 16880915-16887365 Medicago truncatula
Medtr4g047870 2.0kb downstream 2.0kb downstream 2000 false chr4: 16880915-16882914 Medicago truncatula
Medtr4g047870 5.0kb upstream 5.0kb upstream 9451 true chr4: 16882915-16892365 Medicago truncatula
Medtr4g047870 5.0kb upstream 5.0kb upstream 5000 false chr4: 16887366-16892365 Medicago truncatula
Medtr4g047870 5.0kb downstream 5.0kb downstream 9451 true chr4: 16877915-16887365 Medicago truncatula
Medtr4g047870 5.0kb downstream 5.0kb downstream 5000 false chr4: 16877915-16882914 Medicago truncatula
Medtr4g047870 10.0kb upstream 10.0kb upstream 14451 true chr4: 16882915-16897365 Medicago truncatula
Medtr4g047870 10.0kb upstream 10.0kb upstream 10000 false chr4: 16887366-16897365 Medicago truncatula
Medtr4g047870 10.0kb downstream 10.0kb downstream 14451 true chr4: 16872915-16887365 Medicago truncatula
Medtr4g047870 10.0kb downstream 10.0kb downstream 10000 false chr4: 16872915-16882914 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122312700 5265 Fabidae View MSA
124062930 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low  
cufflinks 0.085        
cufflinks 0.072     Low  
cufflinks 0.003     Low Low
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.088        
cufflinks 0.012     Low  

0 Strain