Gene : Medtr4g093510 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR12300//PTHR12300:SF43 - HVA22-LIKE PROTEINS Description:  TB2/DP1, HVA22 family protein
Genomic Order:  4684 Name:  ? Medtr4g093510
Secondary Identifier:  ? PAC:31106336
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g093510 0.5kb upstream 0.5kb upstream 5072 true chr4: 36978372-36983443 Medicago truncatula
Medtr4g093510 0.5kb upstream 0.5kb upstream 500 false chr4: 36982944-36983443 Medicago truncatula
Medtr4g093510 0.5kb downstream 0.5kb downstream 5072 true chr4: 36977872-36982943 Medicago truncatula
Medtr4g093510 0.5kb downstream 0.5kb downstream 500 false chr4: 36977872-36978371 Medicago truncatula
Medtr4g093510 1.0kb upstream 1.0kb upstream 5572 true chr4: 36978372-36983943 Medicago truncatula
Medtr4g093510 1.0kb upstream 1.0kb upstream 1000 false chr4: 36982944-36983943 Medicago truncatula
Medtr4g093510 1.0kb downstream 1.0kb downstream 5572 true chr4: 36977372-36982943 Medicago truncatula
Medtr4g093510 1.0kb downstream 1.0kb downstream 1000 false chr4: 36977372-36978371 Medicago truncatula
Medtr4g093510 2.0kb upstream 2.0kb upstream 6572 true chr4: 36978372-36984943 Medicago truncatula
Medtr4g093510 2.0kb upstream 2.0kb upstream 2000 false chr4: 36982944-36984943 Medicago truncatula
Medtr4g093510 2.0kb downstream 2.0kb downstream 6572 true chr4: 36976372-36982943 Medicago truncatula
Medtr4g093510 2.0kb downstream 2.0kb downstream 2000 false chr4: 36976372-36978371 Medicago truncatula
Medtr4g093510 5.0kb upstream 5.0kb upstream 9572 true chr4: 36978372-36987943 Medicago truncatula
Medtr4g093510 5.0kb upstream 5.0kb upstream 5000 false chr4: 36982944-36987943 Medicago truncatula
Medtr4g093510 5.0kb downstream 5.0kb downstream 9572 true chr4: 36973372-36982943 Medicago truncatula
Medtr4g093510 5.0kb downstream 5.0kb downstream 5000 false chr4: 36973372-36978371 Medicago truncatula
Medtr4g093510 10.0kb upstream 10.0kb upstream 14572 true chr4: 36978372-36992943 Medicago truncatula
Medtr4g093510 10.0kb upstream 10.0kb upstream 10000 false chr4: 36982944-36992943 Medicago truncatula
Medtr4g093510 10.0kb downstream 10.0kb downstream 14572 true chr4: 36968372-36982943 Medicago truncatula
Medtr4g093510 10.0kb downstream 10.0kb downstream 10000 false chr4: 36968372-36978371 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311964 5265 Fabidae View MSA
124074619 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.001        
cufflinks 3.919       High
cufflinks 1.731        
cufflinks 0.609        
cufflinks 3.275       High
cufflinks 0.163       Low
cufflinks 1.044        
cufflinks 1.887        
cufflinks 0.813        

0 Strain