Gene : Medtr4g094202 M. truncatula Mt4.0v1
Defline:  (1 of 10) KOG1546 - Metacaspase involved in regulation of apoptosis Description:  ICE-like protease (caspase) p20 domain protein
Genomic Order:  4750 Name:  ? Medtr4g094202
Secondary Identifier:  ? PAC:31111497
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094202 0.5kb upstream 0.5kb upstream 2565 true chr4: 37408920-37411484 Medicago truncatula
Medtr4g094202 0.5kb upstream 0.5kb upstream 500 false chr4: 37408920-37409419 Medicago truncatula
Medtr4g094202 0.5kb downstream 0.5kb downstream 2565 true chr4: 37409420-37411984 Medicago truncatula
Medtr4g094202 0.5kb downstream 0.5kb downstream 500 false chr4: 37411485-37411984 Medicago truncatula
Medtr4g094202 1.0kb upstream 1.0kb upstream 3065 true chr4: 37408420-37411484 Medicago truncatula
Medtr4g094202 1.0kb upstream 1.0kb upstream 1000 false chr4: 37408420-37409419 Medicago truncatula
Medtr4g094202 1.0kb downstream 1.0kb downstream 3065 true chr4: 37409420-37412484 Medicago truncatula
Medtr4g094202 1.0kb downstream 1.0kb downstream 1000 false chr4: 37411485-37412484 Medicago truncatula
Medtr4g094202 2.0kb upstream 2.0kb upstream 4065 true chr4: 37407420-37411484 Medicago truncatula
Medtr4g094202 2.0kb upstream 2.0kb upstream 2000 false chr4: 37407420-37409419 Medicago truncatula
Medtr4g094202 2.0kb downstream 2.0kb downstream 4065 true chr4: 37409420-37413484 Medicago truncatula
Medtr4g094202 2.0kb downstream 2.0kb downstream 2000 false chr4: 37411485-37413484 Medicago truncatula
Medtr4g094202 5.0kb upstream 5.0kb upstream 7065 true chr4: 37404420-37411484 Medicago truncatula
Medtr4g094202 5.0kb upstream 5.0kb upstream 5000 false chr4: 37404420-37409419 Medicago truncatula
Medtr4g094202 5.0kb downstream 5.0kb downstream 7065 true chr4: 37409420-37416484 Medicago truncatula
Medtr4g094202 5.0kb downstream 5.0kb downstream 5000 false chr4: 37411485-37416484 Medicago truncatula
Medtr4g094202 10.0kb upstream 10.0kb upstream 12065 true chr4: 37399420-37411484 Medicago truncatula
Medtr4g094202 10.0kb upstream 10.0kb upstream 10000 false chr4: 37399420-37409419 Medicago truncatula
Medtr4g094202 10.0kb downstream 10.0kb downstream 12065 true chr4: 37409420-37421484 Medicago truncatula
Medtr4g094202 10.0kb downstream 10.0kb downstream 10000 false chr4: 37411485-37421484 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301776 5265 Fabidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.058     Low Low
cufflinks 0.39        
cufflinks 0.47        
cufflinks 0.159        
cufflinks 0.495        
cufflinks 0.747       High
cufflinks 0.19        
cufflinks 0.243        
cufflinks 0.349        

0 Strain