Gene : Medtr4g094380 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12838 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 Description:  U3 small nucleolar RNA-associated protein, putative
Genomic Order:  4810 Name:  ? Medtr4g094380
Secondary Identifier:  ? PAC:31112999
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094380 0.5kb upstream 0.5kb upstream 5182 true chr4: 37860451-37865632 Medicago truncatula
Medtr4g094380 0.5kb upstream 0.5kb upstream 500 false chr4: 37865133-37865632 Medicago truncatula
Medtr4g094380 0.5kb downstream 0.5kb downstream 5182 true chr4: 37859951-37865132 Medicago truncatula
Medtr4g094380 0.5kb downstream 0.5kb downstream 500 false chr4: 37859951-37860450 Medicago truncatula
Medtr4g094380 1.0kb upstream 1.0kb upstream 5682 true chr4: 37860451-37866132 Medicago truncatula
Medtr4g094380 1.0kb upstream 1.0kb upstream 1000 false chr4: 37865133-37866132 Medicago truncatula
Medtr4g094380 1.0kb downstream 1.0kb downstream 5682 true chr4: 37859451-37865132 Medicago truncatula
Medtr4g094380 1.0kb downstream 1.0kb downstream 1000 false chr4: 37859451-37860450 Medicago truncatula
Medtr4g094380 2.0kb upstream 2.0kb upstream 6682 true chr4: 37860451-37867132 Medicago truncatula
Medtr4g094380 2.0kb upstream 2.0kb upstream 2000 false chr4: 37865133-37867132 Medicago truncatula
Medtr4g094380 2.0kb downstream 2.0kb downstream 6682 true chr4: 37858451-37865132 Medicago truncatula
Medtr4g094380 2.0kb downstream 2.0kb downstream 2000 false chr4: 37858451-37860450 Medicago truncatula
Medtr4g094380 5.0kb upstream 5.0kb upstream 9682 true chr4: 37860451-37870132 Medicago truncatula
Medtr4g094380 5.0kb upstream 5.0kb upstream 5000 false chr4: 37865133-37870132 Medicago truncatula
Medtr4g094380 5.0kb downstream 5.0kb downstream 9682 true chr4: 37855451-37865132 Medicago truncatula
Medtr4g094380 5.0kb downstream 5.0kb downstream 5000 false chr4: 37855451-37860450 Medicago truncatula
Medtr4g094380 10.0kb upstream 10.0kb upstream 14682 true chr4: 37860451-37875132 Medicago truncatula
Medtr4g094380 10.0kb upstream 10.0kb upstream 10000 false chr4: 37865133-37875132 Medicago truncatula
Medtr4g094380 10.0kb downstream 10.0kb downstream 14682 true chr4: 37850451-37865132 Medicago truncatula
Medtr4g094380 10.0kb downstream 10.0kb downstream 10000 false chr4: 37850451-37860450 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026243 5273 Angiosperm View MSA
122301555 5265 Fabidae View MSA
124062560 5270 Rosid View MSA
123737231 5271 Pentapetalae View MSA
122787180 5272 Eudicot View MSA
121350042 5274 Embryophyte View MSA
123425029 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.592        
cufflinks 2.461        
cufflinks 2.374        
cufflinks 0.715       Low
cufflinks 2.925       High
cufflinks 0.575       Low
cufflinks 1.197        
cufflinks 2.524        
cufflinks 0.907        

0 Strain