Gene : Medtr4g082950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11468//PTHR11468:SF14 - GLYCOGEN PHOSPHORYLASE Description:  glycogen/starch/alpha-glucan phosphorylase family protein
Genomic Order:  4049 Name:  ? Medtr4g082950
Secondary Identifier:  ? PAC:31110934
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5941 Medicago truncatula pathologic  
Mtruncatula PWY-7238 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g082950 0.5kb upstream 0.5kb upstream 8056 true chr4: 32249597-32257652 Medicago truncatula
Medtr4g082950 0.5kb upstream 0.5kb upstream 500 false chr4: 32249597-32250096 Medicago truncatula
Medtr4g082950 0.5kb downstream 0.5kb downstream 8056 true chr4: 32250097-32258152 Medicago truncatula
Medtr4g082950 0.5kb downstream 0.5kb downstream 500 false chr4: 32257653-32258152 Medicago truncatula
Medtr4g082950 1.0kb upstream 1.0kb upstream 8556 true chr4: 32249097-32257652 Medicago truncatula
Medtr4g082950 1.0kb upstream 1.0kb upstream 1000 false chr4: 32249097-32250096 Medicago truncatula
Medtr4g082950 1.0kb downstream 1.0kb downstream 8556 true chr4: 32250097-32258652 Medicago truncatula
Medtr4g082950 1.0kb downstream 1.0kb downstream 1000 false chr4: 32257653-32258652 Medicago truncatula
Medtr4g082950 2.0kb upstream 2.0kb upstream 9556 true chr4: 32248097-32257652 Medicago truncatula
Medtr4g082950 2.0kb upstream 2.0kb upstream 2000 false chr4: 32248097-32250096 Medicago truncatula
Medtr4g082950 2.0kb downstream 2.0kb downstream 9556 true chr4: 32250097-32259652 Medicago truncatula
Medtr4g082950 2.0kb downstream 2.0kb downstream 2000 false chr4: 32257653-32259652 Medicago truncatula
Medtr4g082950 5.0kb upstream 5.0kb upstream 12556 true chr4: 32245097-32257652 Medicago truncatula
Medtr4g082950 5.0kb upstream 5.0kb upstream 5000 false chr4: 32245097-32250096 Medicago truncatula
Medtr4g082950 5.0kb downstream 5.0kb downstream 12556 true chr4: 32250097-32262652 Medicago truncatula
Medtr4g082950 5.0kb downstream 5.0kb downstream 5000 false chr4: 32257653-32262652 Medicago truncatula
Medtr4g082950 10.0kb upstream 10.0kb upstream 17556 true chr4: 32240097-32257652 Medicago truncatula
Medtr4g082950 10.0kb upstream 10.0kb upstream 10000 false chr4: 32240097-32250096 Medicago truncatula
Medtr4g082950 10.0kb downstream 10.0kb downstream 17556 true chr4: 32250097-32267652 Medicago truncatula
Medtr4g082950 10.0kb downstream 10.0kb downstream 10000 false chr4: 32257653-32267652 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308252 5265 Fabidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.169        
cufflinks 7.049        
cufflinks 11.265     High High
cufflinks 0.015     Low Low
cufflinks 16.978     High High
cufflinks 0.081     Low  
cufflinks 0.042     Low  
cufflinks 10.432     High High
cufflinks 0.018     Low Low

0 Strain