Gene : Medtr4g085900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11019:SF49 - PROTEIN DJ-1 HOMOLOG C Description:  class I glutamine amidotransferase superfamily protein
Genomic Order:  4219 Name:  ? Medtr4g085900
Secondary Identifier:  ? PAC:31106733
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g085900 0.5kb upstream 0.5kb upstream 3940 true chr4: 33592968-33596907 Medicago truncatula
Medtr4g085900 0.5kb upstream 0.5kb upstream 500 false chr4: 33592968-33593467 Medicago truncatula
Medtr4g085900 0.5kb downstream 0.5kb downstream 3940 true chr4: 33593468-33597407 Medicago truncatula
Medtr4g085900 0.5kb downstream 0.5kb downstream 500 false chr4: 33596908-33597407 Medicago truncatula
Medtr4g085900 1.0kb upstream 1.0kb upstream 4440 true chr4: 33592468-33596907 Medicago truncatula
Medtr4g085900 1.0kb upstream 1.0kb upstream 1000 false chr4: 33592468-33593467 Medicago truncatula
Medtr4g085900 1.0kb downstream 1.0kb downstream 4440 true chr4: 33593468-33597907 Medicago truncatula
Medtr4g085900 1.0kb downstream 1.0kb downstream 1000 false chr4: 33596908-33597907 Medicago truncatula
Medtr4g085900 2.0kb upstream 2.0kb upstream 5440 true chr4: 33591468-33596907 Medicago truncatula
Medtr4g085900 2.0kb upstream 2.0kb upstream 2000 false chr4: 33591468-33593467 Medicago truncatula
Medtr4g085900 2.0kb downstream 2.0kb downstream 5440 true chr4: 33593468-33598907 Medicago truncatula
Medtr4g085900 2.0kb downstream 2.0kb downstream 2000 false chr4: 33596908-33598907 Medicago truncatula
Medtr4g085900 5.0kb upstream 5.0kb upstream 8440 true chr4: 33588468-33596907 Medicago truncatula
Medtr4g085900 5.0kb upstream 5.0kb upstream 5000 false chr4: 33588468-33593467 Medicago truncatula
Medtr4g085900 5.0kb downstream 5.0kb downstream 8440 true chr4: 33593468-33601907 Medicago truncatula
Medtr4g085900 5.0kb downstream 5.0kb downstream 5000 false chr4: 33596908-33601907 Medicago truncatula
Medtr4g085900 10.0kb upstream 10.0kb upstream 13440 true chr4: 33583468-33596907 Medicago truncatula
Medtr4g085900 10.0kb upstream 10.0kb upstream 10000 false chr4: 33583468-33593467 Medicago truncatula
Medtr4g085900 10.0kb downstream 10.0kb downstream 13440 true chr4: 33593468-33606907 Medicago truncatula
Medtr4g085900 10.0kb downstream 10.0kb downstream 10000 false chr4: 33596908-33606907 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299856 5265 Fabidae View MSA
124061338 5270 Rosid View MSA
123738913 5271 Pentapetalae View MSA
122790857 5272 Eudicot View MSA
122044184 5273 Angiosperm View MSA
121350648 5274 Embryophyte View MSA
123428584 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.867        
cufflinks 11.061     High  
cufflinks 14.742     High High
cufflinks 6.146        
cufflinks 7.25        
cufflinks 6.45        
cufflinks 6.566        
cufflinks 16.74     High High
cufflinks 6.078        

0 Strain