Gene : Medtr4g102220 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR33593:SF2 - F5O11.5 Description:  DUF1442 family protein
Genomic Order:  5330 Name:  ? Medtr4g102220
Secondary Identifier:  ? PAC:31107857
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g102220 0.5kb upstream 0.5kb upstream 1371 true chr4: 42326288-42327658 Medicago truncatula
Medtr4g102220 0.5kb upstream 0.5kb upstream 500 false chr4: 42327159-42327658 Medicago truncatula
Medtr4g102220 0.5kb downstream 0.5kb downstream 1371 true chr4: 42325788-42327158 Medicago truncatula
Medtr4g102220 0.5kb downstream 0.5kb downstream 500 false chr4: 42325788-42326287 Medicago truncatula
Medtr4g102220 1.0kb upstream 1.0kb upstream 1871 true chr4: 42326288-42328158 Medicago truncatula
Medtr4g102220 1.0kb upstream 1.0kb upstream 1000 false chr4: 42327159-42328158 Medicago truncatula
Medtr4g102220 1.0kb downstream 1.0kb downstream 1871 true chr4: 42325288-42327158 Medicago truncatula
Medtr4g102220 1.0kb downstream 1.0kb downstream 1000 false chr4: 42325288-42326287 Medicago truncatula
Medtr4g102220 2.0kb upstream 2.0kb upstream 2871 true chr4: 42326288-42329158 Medicago truncatula
Medtr4g102220 2.0kb upstream 2.0kb upstream 2000 false chr4: 42327159-42329158 Medicago truncatula
Medtr4g102220 2.0kb downstream 2.0kb downstream 2871 true chr4: 42324288-42327158 Medicago truncatula
Medtr4g102220 2.0kb downstream 2.0kb downstream 2000 false chr4: 42324288-42326287 Medicago truncatula
Medtr4g102220 5.0kb upstream 5.0kb upstream 5871 true chr4: 42326288-42332158 Medicago truncatula
Medtr4g102220 5.0kb upstream 5.0kb upstream 5000 false chr4: 42327159-42332158 Medicago truncatula
Medtr4g102220 5.0kb downstream 5.0kb downstream 5871 true chr4: 42321288-42327158 Medicago truncatula
Medtr4g102220 5.0kb downstream 5.0kb downstream 5000 false chr4: 42321288-42326287 Medicago truncatula
Medtr4g102220 10.0kb upstream 10.0kb upstream 10871 true chr4: 42326288-42337158 Medicago truncatula
Medtr4g102220 10.0kb upstream 10.0kb upstream 10000 false chr4: 42327159-42337158 Medicago truncatula
Medtr4g102220 10.0kb downstream 10.0kb downstream 10871 true chr4: 42316288-42327158 Medicago truncatula
Medtr4g102220 10.0kb downstream 10.0kb downstream 10000 false chr4: 42316288-42326287 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
122310790 5265 Fabidae View MSA
124070642 5270 Rosid View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 350.02     High  
cufflinks 67.575     High  
cufflinks 115.373     High  
cufflinks 191.79     High  
cufflinks 18.825     High Low
cufflinks 621.758     High High
cufflinks 508.269     High  
cufflinks 146.007     High  
cufflinks 366.323     High  

0 Strain