Gene : Medtr4g091880 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Description:  plant U-box protein
Genomic Order:  4606 Name:  ? Medtr4g091880
Secondary Identifier:  ? PAC:31111748
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g091880 0.5kb upstream 0.5kb upstream 2361 true chr4: 36447591-36449951 Medicago truncatula
Medtr4g091880 0.5kb upstream 0.5kb upstream 500 false chr4: 36447591-36448090 Medicago truncatula
Medtr4g091880 0.5kb downstream 0.5kb downstream 2361 true chr4: 36448091-36450451 Medicago truncatula
Medtr4g091880 0.5kb downstream 0.5kb downstream 500 false chr4: 36449952-36450451 Medicago truncatula
Medtr4g091880 1.0kb upstream 1.0kb upstream 2861 true chr4: 36447091-36449951 Medicago truncatula
Medtr4g091880 1.0kb upstream 1.0kb upstream 1000 false chr4: 36447091-36448090 Medicago truncatula
Medtr4g091880 1.0kb downstream 1.0kb downstream 2861 true chr4: 36448091-36450951 Medicago truncatula
Medtr4g091880 1.0kb downstream 1.0kb downstream 1000 false chr4: 36449952-36450951 Medicago truncatula
Medtr4g091880 2.0kb upstream 2.0kb upstream 3861 true chr4: 36446091-36449951 Medicago truncatula
Medtr4g091880 2.0kb upstream 2.0kb upstream 2000 false chr4: 36446091-36448090 Medicago truncatula
Medtr4g091880 2.0kb downstream 2.0kb downstream 3861 true chr4: 36448091-36451951 Medicago truncatula
Medtr4g091880 2.0kb downstream 2.0kb downstream 2000 false chr4: 36449952-36451951 Medicago truncatula
Medtr4g091880 5.0kb upstream 5.0kb upstream 6861 true chr4: 36443091-36449951 Medicago truncatula
Medtr4g091880 5.0kb upstream 5.0kb upstream 5000 false chr4: 36443091-36448090 Medicago truncatula
Medtr4g091880 5.0kb downstream 5.0kb downstream 6861 true chr4: 36448091-36454951 Medicago truncatula
Medtr4g091880 5.0kb downstream 5.0kb downstream 5000 false chr4: 36449952-36454951 Medicago truncatula
Medtr4g091880 10.0kb upstream 10.0kb upstream 11861 true chr4: 36438091-36449951 Medicago truncatula
Medtr4g091880 10.0kb upstream 10.0kb upstream 10000 false chr4: 36438091-36448090 Medicago truncatula
Medtr4g091880 10.0kb downstream 10.0kb downstream 11861 true chr4: 36448091-36459951 Medicago truncatula
Medtr4g091880 10.0kb downstream 10.0kb downstream 10000 false chr4: 36449952-36459951 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305507 5265 Fabidae View MSA
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.337       Low
cufflinks 2.819        
cufflinks 3.212        
cufflinks 4.662       High
cufflinks 3.917       High
cufflinks 2.918        
cufflinks 1.664       Low
cufflinks 2.35        
cufflinks 2.405        

0 Strain