Gene : Medtr4g077797 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12548 - TRANSCRIPTION FACTOR DP Description:  transcription factor DP, E2 dimerization partner protein
Genomic Order:  3712 Name:  ? Medtr4g077797
Secondary Identifier:  ? PAC:31107393
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g077797 0.5kb upstream 0.5kb upstream 5073 true chr4: 29864608-29869680 Medicago truncatula
Medtr4g077797 0.5kb upstream 0.5kb upstream 500 false chr4: 29864608-29865107 Medicago truncatula
Medtr4g077797 0.5kb downstream 0.5kb downstream 5073 true chr4: 29865108-29870180 Medicago truncatula
Medtr4g077797 0.5kb downstream 0.5kb downstream 500 false chr4: 29869681-29870180 Medicago truncatula
Medtr4g077797 1.0kb upstream 1.0kb upstream 5573 true chr4: 29864108-29869680 Medicago truncatula
Medtr4g077797 1.0kb upstream 1.0kb upstream 1000 false chr4: 29864108-29865107 Medicago truncatula
Medtr4g077797 1.0kb downstream 1.0kb downstream 5573 true chr4: 29865108-29870680 Medicago truncatula
Medtr4g077797 1.0kb downstream 1.0kb downstream 1000 false chr4: 29869681-29870680 Medicago truncatula
Medtr4g077797 2.0kb upstream 2.0kb upstream 6573 true chr4: 29863108-29869680 Medicago truncatula
Medtr4g077797 2.0kb upstream 2.0kb upstream 2000 false chr4: 29863108-29865107 Medicago truncatula
Medtr4g077797 2.0kb downstream 2.0kb downstream 6573 true chr4: 29865108-29871680 Medicago truncatula
Medtr4g077797 2.0kb downstream 2.0kb downstream 2000 false chr4: 29869681-29871680 Medicago truncatula
Medtr4g077797 5.0kb upstream 5.0kb upstream 9573 true chr4: 29860108-29869680 Medicago truncatula
Medtr4g077797 5.0kb upstream 5.0kb upstream 5000 false chr4: 29860108-29865107 Medicago truncatula
Medtr4g077797 5.0kb downstream 5.0kb downstream 9573 true chr4: 29865108-29874680 Medicago truncatula
Medtr4g077797 5.0kb downstream 5.0kb downstream 5000 false chr4: 29869681-29874680 Medicago truncatula
Medtr4g077797 10.0kb upstream 10.0kb upstream 14573 true chr4: 29855108-29869680 Medicago truncatula
Medtr4g077797 10.0kb upstream 10.0kb upstream 10000 false chr4: 29855108-29865107 Medicago truncatula
Medtr4g077797 10.0kb downstream 10.0kb downstream 14573 true chr4: 29865108-29879680 Medicago truncatula
Medtr4g077797 10.0kb downstream 10.0kb downstream 10000 false chr4: 29869681-29879680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295636 5265 Fabidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.554        
cufflinks 3.621        
cufflinks 3.847        
cufflinks 4.977       High
cufflinks 3.523        
cufflinks 3.162       Low
cufflinks 4.503       High
cufflinks 3.475        
cufflinks 4.022        

0 Strain