Gene : Medtr4g079380 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  3828
Name:  ? Medtr4g079380 Secondary Identifier:  ? PAC:31111642
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g079380 0.5kb upstream 0.5kb upstream 893 true chr4: 30680824-30681716 Medicago truncatula
Medtr4g079380 0.5kb upstream 0.5kb upstream 500 false chr4: 30681217-30681716 Medicago truncatula
Medtr4g079380 0.5kb downstream 0.5kb downstream 893 true chr4: 30680324-30681216 Medicago truncatula
Medtr4g079380 0.5kb downstream 0.5kb downstream 500 false chr4: 30680324-30680823 Medicago truncatula
Medtr4g079380 1.0kb upstream 1.0kb upstream 1393 true chr4: 30680824-30682216 Medicago truncatula
Medtr4g079380 1.0kb upstream 1.0kb upstream 1000 false chr4: 30681217-30682216 Medicago truncatula
Medtr4g079380 1.0kb downstream 1.0kb downstream 1393 true chr4: 30679824-30681216 Medicago truncatula
Medtr4g079380 1.0kb downstream 1.0kb downstream 1000 false chr4: 30679824-30680823 Medicago truncatula
Medtr4g079380 2.0kb upstream 2.0kb upstream 2393 true chr4: 30680824-30683216 Medicago truncatula
Medtr4g079380 2.0kb upstream 2.0kb upstream 2000 false chr4: 30681217-30683216 Medicago truncatula
Medtr4g079380 2.0kb downstream 2.0kb downstream 2393 true chr4: 30678824-30681216 Medicago truncatula
Medtr4g079380 2.0kb downstream 2.0kb downstream 2000 false chr4: 30678824-30680823 Medicago truncatula
Medtr4g079380 5.0kb upstream 5.0kb upstream 5393 true chr4: 30680824-30686216 Medicago truncatula
Medtr4g079380 5.0kb upstream 5.0kb upstream 5000 false chr4: 30681217-30686216 Medicago truncatula
Medtr4g079380 5.0kb downstream 5.0kb downstream 5393 true chr4: 30675824-30681216 Medicago truncatula
Medtr4g079380 5.0kb downstream 5.0kb downstream 5000 false chr4: 30675824-30680823 Medicago truncatula
Medtr4g079380 10.0kb upstream 10.0kb upstream 10393 true chr4: 30680824-30691216 Medicago truncatula
Medtr4g079380 10.0kb upstream 10.0kb upstream 10000 false chr4: 30681217-30691216 Medicago truncatula
Medtr4g079380 10.0kb downstream 10.0kb downstream 10393 true chr4: 30670824-30681216 Medicago truncatula
Medtr4g079380 10.0kb downstream 10.0kb downstream 10000 false chr4: 30670824-30680823 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121624471 5273 Angiosperm Singleton cluster - no MSA
122262318 5265 Fabidae Singleton cluster - no MSA
124003568 5270 Rosid Singleton cluster - no MSA
123577714 5271 Pentapetalae Singleton cluster - no MSA
122612424 5272 Eudicot Singleton cluster - no MSA
120896575 5274 Embryophyte Singleton cluster - no MSA
122937230 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.139        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.402       High
cufflinks 0.204        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.524        

0 Strain