Gene : Medtr4g079363 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11439//PTHR11439:SF163 - GAG-POL-RELATED RETROTRANSPOSON Description:  hypothetical protein
Genomic Order:  3826 Name:  ? Medtr4g079363
Secondary Identifier:  ? PAC:31112709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g079363 0.5kb upstream 0.5kb upstream 1285 true chr4: 30665343-30666627 Medicago truncatula
Medtr4g079363 0.5kb upstream 0.5kb upstream 500 false chr4: 30665343-30665842 Medicago truncatula
Medtr4g079363 0.5kb downstream 0.5kb downstream 1285 true chr4: 30665843-30667127 Medicago truncatula
Medtr4g079363 0.5kb downstream 0.5kb downstream 500 false chr4: 30666628-30667127 Medicago truncatula
Medtr4g079363 1.0kb upstream 1.0kb upstream 1785 true chr4: 30664843-30666627 Medicago truncatula
Medtr4g079363 1.0kb upstream 1.0kb upstream 1000 false chr4: 30664843-30665842 Medicago truncatula
Medtr4g079363 1.0kb downstream 1.0kb downstream 1785 true chr4: 30665843-30667627 Medicago truncatula
Medtr4g079363 1.0kb downstream 1.0kb downstream 1000 false chr4: 30666628-30667627 Medicago truncatula
Medtr4g079363 2.0kb upstream 2.0kb upstream 2785 true chr4: 30663843-30666627 Medicago truncatula
Medtr4g079363 2.0kb upstream 2.0kb upstream 2000 false chr4: 30663843-30665842 Medicago truncatula
Medtr4g079363 2.0kb downstream 2.0kb downstream 2785 true chr4: 30665843-30668627 Medicago truncatula
Medtr4g079363 2.0kb downstream 2.0kb downstream 2000 false chr4: 30666628-30668627 Medicago truncatula
Medtr4g079363 5.0kb upstream 5.0kb upstream 5785 true chr4: 30660843-30666627 Medicago truncatula
Medtr4g079363 5.0kb upstream 5.0kb upstream 5000 false chr4: 30660843-30665842 Medicago truncatula
Medtr4g079363 5.0kb downstream 5.0kb downstream 5785 true chr4: 30665843-30671627 Medicago truncatula
Medtr4g079363 5.0kb downstream 5.0kb downstream 5000 false chr4: 30666628-30671627 Medicago truncatula
Medtr4g079363 10.0kb upstream 10.0kb upstream 10785 true chr4: 30655843-30666627 Medicago truncatula
Medtr4g079363 10.0kb upstream 10.0kb upstream 10000 false chr4: 30655843-30665842 Medicago truncatula
Medtr4g079363 10.0kb downstream 10.0kb downstream 10785 true chr4: 30665843-30676627 Medicago truncatula
Medtr4g079363 10.0kb downstream 10.0kb downstream 10000 false chr4: 30666628-30676627 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122315290 5265 Fabidae View MSA
124038140 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain