Gene : Medtr4g081170 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Description:  trafficking protein particle complex subunit-like protein
Genomic Order:  3934 Name:  ? Medtr4g081170
Secondary Identifier:  ? PAC:31108856
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g081170 0.5kb upstream 0.5kb upstream 3465 true chr4: 31424935-31428399 Medicago truncatula
Medtr4g081170 0.5kb upstream 0.5kb upstream 500 false chr4: 31424935-31425434 Medicago truncatula
Medtr4g081170 0.5kb downstream 0.5kb downstream 3465 true chr4: 31425435-31428899 Medicago truncatula
Medtr4g081170 0.5kb downstream 0.5kb downstream 500 false chr4: 31428400-31428899 Medicago truncatula
Medtr4g081170 1.0kb upstream 1.0kb upstream 3965 true chr4: 31424435-31428399 Medicago truncatula
Medtr4g081170 1.0kb upstream 1.0kb upstream 1000 false chr4: 31424435-31425434 Medicago truncatula
Medtr4g081170 1.0kb downstream 1.0kb downstream 3965 true chr4: 31425435-31429399 Medicago truncatula
Medtr4g081170 1.0kb downstream 1.0kb downstream 1000 false chr4: 31428400-31429399 Medicago truncatula
Medtr4g081170 2.0kb upstream 2.0kb upstream 4965 true chr4: 31423435-31428399 Medicago truncatula
Medtr4g081170 2.0kb upstream 2.0kb upstream 2000 false chr4: 31423435-31425434 Medicago truncatula
Medtr4g081170 2.0kb downstream 2.0kb downstream 4965 true chr4: 31425435-31430399 Medicago truncatula
Medtr4g081170 2.0kb downstream 2.0kb downstream 2000 false chr4: 31428400-31430399 Medicago truncatula
Medtr4g081170 5.0kb upstream 5.0kb upstream 7965 true chr4: 31420435-31428399 Medicago truncatula
Medtr4g081170 5.0kb upstream 5.0kb upstream 5000 false chr4: 31420435-31425434 Medicago truncatula
Medtr4g081170 5.0kb downstream 5.0kb downstream 7965 true chr4: 31425435-31433399 Medicago truncatula
Medtr4g081170 5.0kb downstream 5.0kb downstream 5000 false chr4: 31428400-31433399 Medicago truncatula
Medtr4g081170 10.0kb upstream 10.0kb upstream 12965 true chr4: 31415435-31428399 Medicago truncatula
Medtr4g081170 10.0kb upstream 10.0kb upstream 10000 false chr4: 31415435-31425434 Medicago truncatula
Medtr4g081170 10.0kb downstream 10.0kb downstream 12965 true chr4: 31425435-31438399 Medicago truncatula
Medtr4g081170 10.0kb downstream 10.0kb downstream 10000 false chr4: 31428400-31438399 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305865 5265 Fabidae View MSA
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.693        
cufflinks 10.009     High  
cufflinks 8.72        
cufflinks 13.115     High  
cufflinks 10.817     High  
cufflinks 6.325       Low
cufflinks 13.617     High  
cufflinks 8.587        
cufflinks 16.429     High High

0 Strain