Gene : Medtr4g075450 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11880:SF10 - 40S RIBOSOMAL PROTEIN S15-6 Description:  40S ribosomal protein S15-4
Genomic Order:  3559 Name:  ? Medtr4g075450
Secondary Identifier:  ? PAC:31114617
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g075450 0.5kb upstream 0.5kb upstream 959 true chr4: 28789382-28790340 Medicago truncatula
Medtr4g075450 0.5kb upstream 0.5kb upstream 500 false chr4: 28789841-28790340 Medicago truncatula
Medtr4g075450 0.5kb downstream 0.5kb downstream 959 true chr4: 28788882-28789840 Medicago truncatula
Medtr4g075450 0.5kb downstream 0.5kb downstream 500 false chr4: 28788882-28789381 Medicago truncatula
Medtr4g075450 1.0kb upstream 1.0kb upstream 1459 true chr4: 28789382-28790840 Medicago truncatula
Medtr4g075450 1.0kb upstream 1.0kb upstream 1000 false chr4: 28789841-28790840 Medicago truncatula
Medtr4g075450 1.0kb downstream 1.0kb downstream 1459 true chr4: 28788382-28789840 Medicago truncatula
Medtr4g075450 1.0kb downstream 1.0kb downstream 1000 false chr4: 28788382-28789381 Medicago truncatula
Medtr4g075450 2.0kb upstream 2.0kb upstream 2459 true chr4: 28789382-28791840 Medicago truncatula
Medtr4g075450 2.0kb upstream 2.0kb upstream 2000 false chr4: 28789841-28791840 Medicago truncatula
Medtr4g075450 2.0kb downstream 2.0kb downstream 2459 true chr4: 28787382-28789840 Medicago truncatula
Medtr4g075450 2.0kb downstream 2.0kb downstream 2000 false chr4: 28787382-28789381 Medicago truncatula
Medtr4g075450 5.0kb upstream 5.0kb upstream 5459 true chr4: 28789382-28794840 Medicago truncatula
Medtr4g075450 5.0kb upstream 5.0kb upstream 5000 false chr4: 28789841-28794840 Medicago truncatula
Medtr4g075450 5.0kb downstream 5.0kb downstream 5459 true chr4: 28784382-28789840 Medicago truncatula
Medtr4g075450 5.0kb downstream 5.0kb downstream 5000 false chr4: 28784382-28789381 Medicago truncatula
Medtr4g075450 10.0kb upstream 10.0kb upstream 10459 true chr4: 28789382-28799840 Medicago truncatula
Medtr4g075450 10.0kb upstream 10.0kb upstream 10000 false chr4: 28789841-28799840 Medicago truncatula
Medtr4g075450 10.0kb downstream 10.0kb downstream 10459 true chr4: 28779382-28789840 Medicago truncatula
Medtr4g075450 10.0kb downstream 10.0kb downstream 10000 false chr4: 28779382-28789381 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657117 5273 Angiosperm View MSA
122263018 5265 Fabidae Singleton cluster - no MSA
124038358 5270 Rosid View MSA
123610768 5271 Pentapetalae View MSA
122645360 5272 Eudicot View MSA
120929165 5274 Embryophyte View MSA
122969737 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.798        
cufflinks 1.905       Low
cufflinks 3.455        
cufflinks 13.254     High High
cufflinks 3.499        
cufflinks 8.523       High
cufflinks 4.064        
cufflinks 2.514        
cufflinks 5.103        

0 Strain