Gene : Medtr4g109530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11972//PTHR11972:SF76 - NADPH OXIDASE Description:  respiratory burst oxidase-like protein
Genomic Order:  5768 Name:  ? Medtr4g109530
Secondary Identifier:  ? PAC:31108372
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g109530 0.5kb upstream 0.5kb upstream 5996 true chr4: 45513777-45519772 Medicago truncatula
Medtr4g109530 0.5kb upstream 0.5kb upstream 500 false chr4: 45519273-45519772 Medicago truncatula
Medtr4g109530 0.5kb downstream 0.5kb downstream 5996 true chr4: 45513277-45519272 Medicago truncatula
Medtr4g109530 0.5kb downstream 0.5kb downstream 500 false chr4: 45513277-45513776 Medicago truncatula
Medtr4g109530 1.0kb upstream 1.0kb upstream 6496 true chr4: 45513777-45520272 Medicago truncatula
Medtr4g109530 1.0kb upstream 1.0kb upstream 1000 false chr4: 45519273-45520272 Medicago truncatula
Medtr4g109530 1.0kb downstream 1.0kb downstream 6496 true chr4: 45512777-45519272 Medicago truncatula
Medtr4g109530 1.0kb downstream 1.0kb downstream 1000 false chr4: 45512777-45513776 Medicago truncatula
Medtr4g109530 2.0kb upstream 2.0kb upstream 7496 true chr4: 45513777-45521272 Medicago truncatula
Medtr4g109530 2.0kb upstream 2.0kb upstream 2000 false chr4: 45519273-45521272 Medicago truncatula
Medtr4g109530 2.0kb downstream 2.0kb downstream 7496 true chr4: 45511777-45519272 Medicago truncatula
Medtr4g109530 2.0kb downstream 2.0kb downstream 2000 false chr4: 45511777-45513776 Medicago truncatula
Medtr4g109530 5.0kb upstream 5.0kb upstream 10496 true chr4: 45513777-45524272 Medicago truncatula
Medtr4g109530 5.0kb upstream 5.0kb upstream 5000 false chr4: 45519273-45524272 Medicago truncatula
Medtr4g109530 5.0kb downstream 5.0kb downstream 10496 true chr4: 45508777-45519272 Medicago truncatula
Medtr4g109530 5.0kb downstream 5.0kb downstream 5000 false chr4: 45508777-45513776 Medicago truncatula
Medtr4g109530 10.0kb upstream 10.0kb upstream 15496 true chr4: 45513777-45529272 Medicago truncatula
Medtr4g109530 10.0kb upstream 10.0kb upstream 10000 false chr4: 45519273-45529272 Medicago truncatula
Medtr4g109530 10.0kb downstream 10.0kb downstream 15496 true chr4: 45503777-45519272 Medicago truncatula
Medtr4g109530 10.0kb downstream 10.0kb downstream 10000 false chr4: 45503777-45513776 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300900 5265 Fabidae View MSA
124037612 5270 Rosid View MSA
123743379 5271 Pentapetalae View MSA
122794303 5272 Eudicot View MSA
122049600 5273 Angiosperm View MSA
121311497 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.553       High
cufflinks 0.091        
cufflinks 0.049     Low Low
cufflinks 0.239        
cufflinks 0.126        
cufflinks 0.244        
cufflinks 0.439        
cufflinks 0.028     Low Low
cufflinks 0.358        

0 Strain