Gene : Medtr4g109830 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF166 - MADS BOX PROTEIN Description:  MADS-box transcription factor
Genomic Order:  5789 Name:  ? Medtr4g109830
Secondary Identifier:  ? PAC:31111060
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g109830 0.5kb upstream 0.5kb upstream 6081 true chr4: 45689625-45695705 Medicago truncatula
Medtr4g109830 0.5kb upstream 0.5kb upstream 500 false chr4: 45689625-45690124 Medicago truncatula
Medtr4g109830 0.5kb downstream 0.5kb downstream 6081 true chr4: 45690125-45696205 Medicago truncatula
Medtr4g109830 0.5kb downstream 0.5kb downstream 500 false chr4: 45695706-45696205 Medicago truncatula
Medtr4g109830 1.0kb upstream 1.0kb upstream 6581 true chr4: 45689125-45695705 Medicago truncatula
Medtr4g109830 1.0kb upstream 1.0kb upstream 1000 false chr4: 45689125-45690124 Medicago truncatula
Medtr4g109830 1.0kb downstream 1.0kb downstream 6581 true chr4: 45690125-45696705 Medicago truncatula
Medtr4g109830 1.0kb downstream 1.0kb downstream 1000 false chr4: 45695706-45696705 Medicago truncatula
Medtr4g109830 2.0kb upstream 2.0kb upstream 7581 true chr4: 45688125-45695705 Medicago truncatula
Medtr4g109830 2.0kb upstream 2.0kb upstream 2000 false chr4: 45688125-45690124 Medicago truncatula
Medtr4g109830 2.0kb downstream 2.0kb downstream 7581 true chr4: 45690125-45697705 Medicago truncatula
Medtr4g109830 2.0kb downstream 2.0kb downstream 2000 false chr4: 45695706-45697705 Medicago truncatula
Medtr4g109830 5.0kb upstream 5.0kb upstream 10581 true chr4: 45685125-45695705 Medicago truncatula
Medtr4g109830 5.0kb upstream 5.0kb upstream 5000 false chr4: 45685125-45690124 Medicago truncatula
Medtr4g109830 5.0kb downstream 5.0kb downstream 10581 true chr4: 45690125-45700705 Medicago truncatula
Medtr4g109830 5.0kb downstream 5.0kb downstream 5000 false chr4: 45695706-45700705 Medicago truncatula
Medtr4g109830 10.0kb upstream 10.0kb upstream 15581 true chr4: 45680125-45695705 Medicago truncatula
Medtr4g109830 10.0kb upstream 10.0kb upstream 10000 false chr4: 45680125-45690124 Medicago truncatula
Medtr4g109830 10.0kb downstream 10.0kb downstream 15581 true chr4: 45690125-45705705 Medicago truncatula
Medtr4g109830 10.0kb downstream 10.0kb downstream 10000 false chr4: 45695706-45705705 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122302751 5265 Fabidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.813        
cufflinks 1.738       High
cufflinks 0.781        
cufflinks 0.357       Low
cufflinks 0.926        
cufflinks 0.228       Low
cufflinks 1.165        
cufflinks 0.863        
cufflinks 0.986        

0 Strain