Gene : Medtr4g111985 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10625:SF120 - HISTONE DEACETYLASE 15 Description:  histone deacetylase superfamily protein
Genomic Order:  5879 Name:  ? Medtr4g111985
Secondary Identifier:  ? PAC:31114943
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g111985 0.5kb upstream 0.5kb upstream 11445 true chr4: 46328537-46339981 Medicago truncatula
Medtr4g111985 0.5kb upstream 0.5kb upstream 500 false chr4: 46339482-46339981 Medicago truncatula
Medtr4g111985 0.5kb downstream 0.5kb downstream 11445 true chr4: 46328037-46339481 Medicago truncatula
Medtr4g111985 0.5kb downstream 0.5kb downstream 500 false chr4: 46328037-46328536 Medicago truncatula
Medtr4g111985 1.0kb upstream 1.0kb upstream 11945 true chr4: 46328537-46340481 Medicago truncatula
Medtr4g111985 1.0kb upstream 1.0kb upstream 1000 false chr4: 46339482-46340481 Medicago truncatula
Medtr4g111985 1.0kb downstream 1.0kb downstream 11945 true chr4: 46327537-46339481 Medicago truncatula
Medtr4g111985 1.0kb downstream 1.0kb downstream 1000 false chr4: 46327537-46328536 Medicago truncatula
Medtr4g111985 2.0kb upstream 2.0kb upstream 12945 true chr4: 46328537-46341481 Medicago truncatula
Medtr4g111985 2.0kb upstream 2.0kb upstream 2000 false chr4: 46339482-46341481 Medicago truncatula
Medtr4g111985 2.0kb downstream 2.0kb downstream 12945 true chr4: 46326537-46339481 Medicago truncatula
Medtr4g111985 2.0kb downstream 2.0kb downstream 2000 false chr4: 46326537-46328536 Medicago truncatula
Medtr4g111985 5.0kb upstream 5.0kb upstream 15945 true chr4: 46328537-46344481 Medicago truncatula
Medtr4g111985 5.0kb upstream 5.0kb upstream 5000 false chr4: 46339482-46344481 Medicago truncatula
Medtr4g111985 5.0kb downstream 5.0kb downstream 15945 true chr4: 46323537-46339481 Medicago truncatula
Medtr4g111985 5.0kb downstream 5.0kb downstream 5000 false chr4: 46323537-46328536 Medicago truncatula
Medtr4g111985 10.0kb upstream 10.0kb upstream 20945 true chr4: 46328537-46349481 Medicago truncatula
Medtr4g111985 10.0kb upstream 10.0kb upstream 10000 false chr4: 46339482-46349481 Medicago truncatula
Medtr4g111985 10.0kb downstream 10.0kb downstream 20945 true chr4: 46318537-46339481 Medicago truncatula
Medtr4g111985 10.0kb downstream 10.0kb downstream 10000 false chr4: 46318537-46328536 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303392 5265 Fabidae View MSA
124065591 5270 Rosid View MSA
123741307 5271 Pentapetalae View MSA
122792610 5272 Eudicot View MSA
122044856 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.697        
cufflinks 0.659        
cufflinks 0.693        
cufflinks 0.153       Low
cufflinks 0.9        
cufflinks 0.083     Low Low
cufflinks 0.34        
cufflinks 0.652        
cufflinks 0.388        

0 Strain