Gene : Medtr4g114330 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23105//PTHR23105:SF57 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Description:  ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Genomic Order:  5975 Name:  ? Medtr4g114330
Secondary Identifier:  ? PAC:31108200
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g114330 0.5kb upstream 0.5kb upstream 2762 true chr4: 46986798-46989559 Medicago truncatula
Medtr4g114330 0.5kb upstream 0.5kb upstream 500 false chr4: 46986798-46987297 Medicago truncatula
Medtr4g114330 0.5kb downstream 0.5kb downstream 2762 true chr4: 46987298-46990059 Medicago truncatula
Medtr4g114330 0.5kb downstream 0.5kb downstream 500 false chr4: 46989560-46990059 Medicago truncatula
Medtr4g114330 1.0kb upstream 1.0kb upstream 3262 true chr4: 46986298-46989559 Medicago truncatula
Medtr4g114330 1.0kb upstream 1.0kb upstream 1000 false chr4: 46986298-46987297 Medicago truncatula
Medtr4g114330 1.0kb downstream 1.0kb downstream 3262 true chr4: 46987298-46990559 Medicago truncatula
Medtr4g114330 1.0kb downstream 1.0kb downstream 1000 false chr4: 46989560-46990559 Medicago truncatula
Medtr4g114330 2.0kb upstream 2.0kb upstream 4262 true chr4: 46985298-46989559 Medicago truncatula
Medtr4g114330 2.0kb upstream 2.0kb upstream 2000 false chr4: 46985298-46987297 Medicago truncatula
Medtr4g114330 2.0kb downstream 2.0kb downstream 4262 true chr4: 46987298-46991559 Medicago truncatula
Medtr4g114330 2.0kb downstream 2.0kb downstream 2000 false chr4: 46989560-46991559 Medicago truncatula
Medtr4g114330 5.0kb upstream 5.0kb upstream 7262 true chr4: 46982298-46989559 Medicago truncatula
Medtr4g114330 5.0kb upstream 5.0kb upstream 5000 false chr4: 46982298-46987297 Medicago truncatula
Medtr4g114330 5.0kb downstream 5.0kb downstream 7262 true chr4: 46987298-46994559 Medicago truncatula
Medtr4g114330 5.0kb downstream 5.0kb downstream 5000 false chr4: 46989560-46994559 Medicago truncatula
Medtr4g114330 10.0kb upstream 10.0kb upstream 12262 true chr4: 46977298-46989559 Medicago truncatula
Medtr4g114330 10.0kb upstream 10.0kb upstream 10000 false chr4: 46977298-46987297 Medicago truncatula
Medtr4g114330 10.0kb downstream 10.0kb downstream 12262 true chr4: 46987298-46999559 Medicago truncatula
Medtr4g114330 10.0kb downstream 10.0kb downstream 10000 false chr4: 46989560-46999559 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295694 5265 Fabidae View MSA
124071487 5270 Rosid View MSA
123745089 5271 Pentapetalae View MSA
122792689 5272 Eudicot View MSA
122048288 5273 Angiosperm View MSA
121348705 5274 Embryophyte View MSA
123423886 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.82     High Low
cufflinks 17.648     High  
cufflinks 19.402     High  
cufflinks 123.312     High High
cufflinks 35.131     High  
cufflinks 101.131     High High
cufflinks 38.805     High  
cufflinks 20.824     High  
cufflinks 47.153     High  

0 Strain