Gene : Medtr4g115170 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10891//PTHR10891:SF546 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Description:  EF hand calcium-binding family protein
Genomic Order:  6041 Name:  ? Medtr4g115170
Secondary Identifier:  ? PAC:31113216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g115170 0.5kb upstream 0.5kb upstream 1768 true chr4: 47538205-47539972 Medicago truncatula
Medtr4g115170 0.5kb upstream 0.5kb upstream 500 false chr4: 47539473-47539972 Medicago truncatula
Medtr4g115170 0.5kb downstream 0.5kb downstream 1768 true chr4: 47537705-47539472 Medicago truncatula
Medtr4g115170 0.5kb downstream 0.5kb downstream 500 false chr4: 47537705-47538204 Medicago truncatula
Medtr4g115170 1.0kb upstream 1.0kb upstream 2268 true chr4: 47538205-47540472 Medicago truncatula
Medtr4g115170 1.0kb upstream 1.0kb upstream 1000 false chr4: 47539473-47540472 Medicago truncatula
Medtr4g115170 1.0kb downstream 1.0kb downstream 2268 true chr4: 47537205-47539472 Medicago truncatula
Medtr4g115170 1.0kb downstream 1.0kb downstream 1000 false chr4: 47537205-47538204 Medicago truncatula
Medtr4g115170 2.0kb upstream 2.0kb upstream 3268 true chr4: 47538205-47541472 Medicago truncatula
Medtr4g115170 2.0kb upstream 2.0kb upstream 2000 false chr4: 47539473-47541472 Medicago truncatula
Medtr4g115170 2.0kb downstream 2.0kb downstream 3268 true chr4: 47536205-47539472 Medicago truncatula
Medtr4g115170 2.0kb downstream 2.0kb downstream 2000 false chr4: 47536205-47538204 Medicago truncatula
Medtr4g115170 5.0kb upstream 5.0kb upstream 6268 true chr4: 47538205-47544472 Medicago truncatula
Medtr4g115170 5.0kb upstream 5.0kb upstream 5000 false chr4: 47539473-47544472 Medicago truncatula
Medtr4g115170 5.0kb downstream 5.0kb downstream 6268 true chr4: 47533205-47539472 Medicago truncatula
Medtr4g115170 5.0kb downstream 5.0kb downstream 5000 false chr4: 47533205-47538204 Medicago truncatula
Medtr4g115170 10.0kb upstream 10.0kb upstream 11268 true chr4: 47538205-47549472 Medicago truncatula
Medtr4g115170 10.0kb upstream 10.0kb upstream 10000 false chr4: 47539473-47549472 Medicago truncatula
Medtr4g115170 10.0kb downstream 10.0kb downstream 11268 true chr4: 47528205-47539472 Medicago truncatula
Medtr4g115170 10.0kb downstream 10.0kb downstream 10000 false chr4: 47528205-47538204 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
122302288 5265 Fabidae View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.162       Low
cufflinks 16.839     High  
cufflinks 26.733     High  
cufflinks 11.966     High  
cufflinks 24.041     High  
cufflinks 23.816     High  
cufflinks 15.521     High  
cufflinks 26.614     High  
cufflinks 8.852        

0 Strain