Gene : Medtr4g105700 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19854:SF15 - TRANSDUCIN BETA-LIKE PROTEIN 3 Description:  transducin/WD40 repeat protein
Genomic Order:  5541 Name:  ? Medtr4g105700
Secondary Identifier:  ? PAC:31113077
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g105700 0.5kb upstream 0.5kb upstream 9494 true chr4: 43877728-43887221 Medicago truncatula
Medtr4g105700 0.5kb upstream 0.5kb upstream 500 false chr4: 43886722-43887221 Medicago truncatula
Medtr4g105700 0.5kb downstream 0.5kb downstream 9494 true chr4: 43877228-43886721 Medicago truncatula
Medtr4g105700 0.5kb downstream 0.5kb downstream 500 false chr4: 43877228-43877727 Medicago truncatula
Medtr4g105700 1.0kb upstream 1.0kb upstream 9994 true chr4: 43877728-43887721 Medicago truncatula
Medtr4g105700 1.0kb upstream 1.0kb upstream 1000 false chr4: 43886722-43887721 Medicago truncatula
Medtr4g105700 1.0kb downstream 1.0kb downstream 9994 true chr4: 43876728-43886721 Medicago truncatula
Medtr4g105700 1.0kb downstream 1.0kb downstream 1000 false chr4: 43876728-43877727 Medicago truncatula
Medtr4g105700 2.0kb upstream 2.0kb upstream 10994 true chr4: 43877728-43888721 Medicago truncatula
Medtr4g105700 2.0kb upstream 2.0kb upstream 2000 false chr4: 43886722-43888721 Medicago truncatula
Medtr4g105700 2.0kb downstream 2.0kb downstream 10994 true chr4: 43875728-43886721 Medicago truncatula
Medtr4g105700 2.0kb downstream 2.0kb downstream 2000 false chr4: 43875728-43877727 Medicago truncatula
Medtr4g105700 5.0kb upstream 5.0kb upstream 13994 true chr4: 43877728-43891721 Medicago truncatula
Medtr4g105700 5.0kb upstream 5.0kb upstream 5000 false chr4: 43886722-43891721 Medicago truncatula
Medtr4g105700 5.0kb downstream 5.0kb downstream 13994 true chr4: 43872728-43886721 Medicago truncatula
Medtr4g105700 5.0kb downstream 5.0kb downstream 5000 false chr4: 43872728-43877727 Medicago truncatula
Medtr4g105700 10.0kb upstream 10.0kb upstream 18994 true chr4: 43877728-43896721 Medicago truncatula
Medtr4g105700 10.0kb upstream 10.0kb upstream 10000 false chr4: 43886722-43896721 Medicago truncatula
Medtr4g105700 10.0kb downstream 10.0kb downstream 18994 true chr4: 43867728-43886721 Medicago truncatula
Medtr4g105700 10.0kb downstream 10.0kb downstream 10000 false chr4: 43867728-43877727 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041178 5273 Angiosperm View MSA
122306961 5265 Fabidae View MSA
124061346 5270 Rosid View MSA
123737886 5271 Pentapetalae View MSA
122786507 5272 Eudicot View MSA
121349403 5274 Embryophyte View MSA
123428044 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.412        
cufflinks 4.189        
cufflinks 5.587        
cufflinks 2.094        
cufflinks 6.22       High
cufflinks 0.816       Low
cufflinks 3.297        
cufflinks 4.793        
cufflinks 3.082        

0 Strain