Gene : Medtr4g124070 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31342:SF12 - F11A17.16 Description:  hydroxyproline-rich glycoprotein family protein
Genomic Order:  6557 Name:  ? Medtr4g124070
Secondary Identifier:  ? PAC:31113891
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g124070 0.5kb upstream 0.5kb upstream 10572 true chr4: 51228250-51238821 Medicago truncatula
Medtr4g124070 0.5kb upstream 0.5kb upstream 500 false chr4: 51228250-51228749 Medicago truncatula
Medtr4g124070 0.5kb downstream 0.5kb downstream 10572 true chr4: 51228750-51239321 Medicago truncatula
Medtr4g124070 0.5kb downstream 0.5kb downstream 500 false chr4: 51238822-51239321 Medicago truncatula
Medtr4g124070 1.0kb upstream 1.0kb upstream 11072 true chr4: 51227750-51238821 Medicago truncatula
Medtr4g124070 1.0kb upstream 1.0kb upstream 1000 false chr4: 51227750-51228749 Medicago truncatula
Medtr4g124070 1.0kb downstream 1.0kb downstream 11072 true chr4: 51228750-51239821 Medicago truncatula
Medtr4g124070 1.0kb downstream 1.0kb downstream 1000 false chr4: 51238822-51239821 Medicago truncatula
Medtr4g124070 2.0kb upstream 2.0kb upstream 12072 true chr4: 51226750-51238821 Medicago truncatula
Medtr4g124070 2.0kb upstream 2.0kb upstream 2000 false chr4: 51226750-51228749 Medicago truncatula
Medtr4g124070 2.0kb downstream 2.0kb downstream 12072 true chr4: 51228750-51240821 Medicago truncatula
Medtr4g124070 2.0kb downstream 2.0kb downstream 2000 false chr4: 51238822-51240821 Medicago truncatula
Medtr4g124070 5.0kb upstream 5.0kb upstream 15072 true chr4: 51223750-51238821 Medicago truncatula
Medtr4g124070 5.0kb upstream 5.0kb upstream 5000 false chr4: 51223750-51228749 Medicago truncatula
Medtr4g124070 5.0kb downstream 5.0kb downstream 15072 true chr4: 51228750-51243821 Medicago truncatula
Medtr4g124070 5.0kb downstream 5.0kb downstream 5000 false chr4: 51238822-51243821 Medicago truncatula
Medtr4g124070 10.0kb upstream 10.0kb upstream 20072 true chr4: 51218750-51238821 Medicago truncatula
Medtr4g124070 10.0kb upstream 10.0kb upstream 10000 false chr4: 51218750-51228749 Medicago truncatula
Medtr4g124070 10.0kb downstream 10.0kb downstream 20072 true chr4: 51228750-51248821 Medicago truncatula
Medtr4g124070 10.0kb downstream 10.0kb downstream 10000 false chr4: 51238822-51248821 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310858 5265 Fabidae View MSA
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.513        
cufflinks 1.243       High
cufflinks 0.721        
cufflinks 0.147        
cufflinks 1.094       High
cufflinks 0.038     Low Low
cufflinks 0.081       Low
cufflinks 0.712        
cufflinks 0.148        

0 Strain