Gene : Medtr4g104260 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12506:SF20 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43 Description:  zinc finger C-x8-C-x5-C-x3-H type family protein
Genomic Order:  5444 Name:  ? Medtr4g104260
Secondary Identifier:  ? PAC:31108600
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g104260 0.5kb upstream 0.5kb upstream 4725 true chr4: 43090696-43095420 Medicago truncatula
Medtr4g104260 0.5kb upstream 0.5kb upstream 500 false chr4: 43094921-43095420 Medicago truncatula
Medtr4g104260 0.5kb downstream 0.5kb downstream 4725 true chr4: 43090196-43094920 Medicago truncatula
Medtr4g104260 0.5kb downstream 0.5kb downstream 500 false chr4: 43090196-43090695 Medicago truncatula
Medtr4g104260 1.0kb upstream 1.0kb upstream 5225 true chr4: 43090696-43095920 Medicago truncatula
Medtr4g104260 1.0kb upstream 1.0kb upstream 1000 false chr4: 43094921-43095920 Medicago truncatula
Medtr4g104260 1.0kb downstream 1.0kb downstream 5225 true chr4: 43089696-43094920 Medicago truncatula
Medtr4g104260 1.0kb downstream 1.0kb downstream 1000 false chr4: 43089696-43090695 Medicago truncatula
Medtr4g104260 2.0kb upstream 2.0kb upstream 6225 true chr4: 43090696-43096920 Medicago truncatula
Medtr4g104260 2.0kb upstream 2.0kb upstream 2000 false chr4: 43094921-43096920 Medicago truncatula
Medtr4g104260 2.0kb downstream 2.0kb downstream 6225 true chr4: 43088696-43094920 Medicago truncatula
Medtr4g104260 2.0kb downstream 2.0kb downstream 2000 false chr4: 43088696-43090695 Medicago truncatula
Medtr4g104260 5.0kb upstream 5.0kb upstream 9225 true chr4: 43090696-43099920 Medicago truncatula
Medtr4g104260 5.0kb upstream 5.0kb upstream 5000 false chr4: 43094921-43099920 Medicago truncatula
Medtr4g104260 5.0kb downstream 5.0kb downstream 9225 true chr4: 43085696-43094920 Medicago truncatula
Medtr4g104260 5.0kb downstream 5.0kb downstream 5000 false chr4: 43085696-43090695 Medicago truncatula
Medtr4g104260 10.0kb upstream 10.0kb upstream 14225 true chr4: 43090696-43104920 Medicago truncatula
Medtr4g104260 10.0kb upstream 10.0kb upstream 10000 false chr4: 43094921-43104920 Medicago truncatula
Medtr4g104260 10.0kb downstream 10.0kb downstream 14225 true chr4: 43080696-43094920 Medicago truncatula
Medtr4g104260 10.0kb downstream 10.0kb downstream 10000 false chr4: 43080696-43090695 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315095 5265 Fabidae View MSA
124063047 5270 Rosid View MSA
123746859 5271 Pentapetalae View MSA
122797489 5272 Eudicot View MSA
122049599 5273 Angiosperm View MSA
121311496 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.189     High  
cufflinks 15.863     High  
cufflinks 17.043     High  
cufflinks 18.872     High  
cufflinks 23.012     High  
cufflinks 7.118       Low
cufflinks 35.706     High High
cufflinks 12.451     High  
cufflinks 35.1     High High

0 Strain