Gene : Medtr4g087080 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  4284
Name:  ? Medtr4g087080 Secondary Identifier:  ? PAC:31107065
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g087080 0.5kb upstream 0.5kb upstream 1152 true chr4: 34108999-34110150 Medicago truncatula
Medtr4g087080 0.5kb upstream 0.5kb upstream 500 false chr4: 34108999-34109498 Medicago truncatula
Medtr4g087080 0.5kb downstream 0.5kb downstream 1152 true chr4: 34109499-34110650 Medicago truncatula
Medtr4g087080 0.5kb downstream 0.5kb downstream 500 false chr4: 34110151-34110650 Medicago truncatula
Medtr4g087080 1.0kb upstream 1.0kb upstream 1652 true chr4: 34108499-34110150 Medicago truncatula
Medtr4g087080 1.0kb upstream 1.0kb upstream 1000 false chr4: 34108499-34109498 Medicago truncatula
Medtr4g087080 1.0kb downstream 1.0kb downstream 1652 true chr4: 34109499-34111150 Medicago truncatula
Medtr4g087080 1.0kb downstream 1.0kb downstream 1000 false chr4: 34110151-34111150 Medicago truncatula
Medtr4g087080 2.0kb upstream 2.0kb upstream 2652 true chr4: 34107499-34110150 Medicago truncatula
Medtr4g087080 2.0kb upstream 2.0kb upstream 2000 false chr4: 34107499-34109498 Medicago truncatula
Medtr4g087080 2.0kb downstream 2.0kb downstream 2652 true chr4: 34109499-34112150 Medicago truncatula
Medtr4g087080 2.0kb downstream 2.0kb downstream 2000 false chr4: 34110151-34112150 Medicago truncatula
Medtr4g087080 5.0kb upstream 5.0kb upstream 5652 true chr4: 34104499-34110150 Medicago truncatula
Medtr4g087080 5.0kb upstream 5.0kb upstream 5000 false chr4: 34104499-34109498 Medicago truncatula
Medtr4g087080 5.0kb downstream 5.0kb downstream 5652 true chr4: 34109499-34115150 Medicago truncatula
Medtr4g087080 5.0kb downstream 5.0kb downstream 5000 false chr4: 34110151-34115150 Medicago truncatula
Medtr4g087080 10.0kb upstream 10.0kb upstream 10652 true chr4: 34099499-34110150 Medicago truncatula
Medtr4g087080 10.0kb upstream 10.0kb upstream 10000 false chr4: 34099499-34109498 Medicago truncatula
Medtr4g087080 10.0kb downstream 10.0kb downstream 10652 true chr4: 34109499-34120150 Medicago truncatula
Medtr4g087080 10.0kb downstream 10.0kb downstream 10000 false chr4: 34110151-34120150 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780041 5273 Angiosperm View MSA
122297653 5265 Fabidae View MSA
124037539 5270 Rosid View MSA
123744872 5271 Pentapetalae View MSA
122771279 5272 Eudicot View MSA
121051675 5274 Embryophyte View MSA
123091755 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.422       Low
cufflinks 41.1     High  
cufflinks 37.41     High  
cufflinks 67.28     High  
cufflinks 24.73     High  
cufflinks 187.221     High High
cufflinks 17.972     High  
cufflinks 25.429     High  
cufflinks 68.964     High  

0 Strain