Gene : Medtr4g101620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10683:SF10 - TRANSALDOLASE-LIKE PROTEIN Description:  transaldolase total2 protein
Genomic Order:  5289 Name:  ? Medtr4g101620
Secondary Identifier:  ? PAC:31106774
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula NONOXIPENT-PWY Medicago truncatula pathologic  
Mtruncatula PENTOSE-P-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5723 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g101620 0.5kb upstream 0.5kb upstream 6260 true chr4: 41988652-41994911 Medicago truncatula
Medtr4g101620 0.5kb upstream 0.5kb upstream 500 false chr4: 41988652-41989151 Medicago truncatula
Medtr4g101620 0.5kb downstream 0.5kb downstream 6260 true chr4: 41989152-41995411 Medicago truncatula
Medtr4g101620 0.5kb downstream 0.5kb downstream 500 false chr4: 41994912-41995411 Medicago truncatula
Medtr4g101620 1.0kb upstream 1.0kb upstream 6760 true chr4: 41988152-41994911 Medicago truncatula
Medtr4g101620 1.0kb upstream 1.0kb upstream 1000 false chr4: 41988152-41989151 Medicago truncatula
Medtr4g101620 1.0kb downstream 1.0kb downstream 6760 true chr4: 41989152-41995911 Medicago truncatula
Medtr4g101620 1.0kb downstream 1.0kb downstream 1000 false chr4: 41994912-41995911 Medicago truncatula
Medtr4g101620 2.0kb upstream 2.0kb upstream 7760 true chr4: 41987152-41994911 Medicago truncatula
Medtr4g101620 2.0kb upstream 2.0kb upstream 2000 false chr4: 41987152-41989151 Medicago truncatula
Medtr4g101620 2.0kb downstream 2.0kb downstream 7760 true chr4: 41989152-41996911 Medicago truncatula
Medtr4g101620 2.0kb downstream 2.0kb downstream 2000 false chr4: 41994912-41996911 Medicago truncatula
Medtr4g101620 5.0kb upstream 5.0kb upstream 10760 true chr4: 41984152-41994911 Medicago truncatula
Medtr4g101620 5.0kb upstream 5.0kb upstream 5000 false chr4: 41984152-41989151 Medicago truncatula
Medtr4g101620 5.0kb downstream 5.0kb downstream 10760 true chr4: 41989152-41999911 Medicago truncatula
Medtr4g101620 5.0kb downstream 5.0kb downstream 5000 false chr4: 41994912-41999911 Medicago truncatula
Medtr4g101620 10.0kb upstream 10.0kb upstream 15760 true chr4: 41979152-41994911 Medicago truncatula
Medtr4g101620 10.0kb upstream 10.0kb upstream 10000 false chr4: 41979152-41989151 Medicago truncatula
Medtr4g101620 10.0kb downstream 10.0kb downstream 15760 true chr4: 41989152-42004911 Medicago truncatula
Medtr4g101620 10.0kb downstream 10.0kb downstream 10000 false chr4: 41994912-42004911 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305152 5265 Fabidae View MSA
124061321 5270 Rosid View MSA
123737527 5271 Pentapetalae View MSA
122787081 5272 Eudicot View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.696        
cufflinks 2.915        
cufflinks 5.832       High
cufflinks 3.286        
cufflinks 3.32        
cufflinks 1.913       Low
cufflinks 1.76       Low
cufflinks 3.534        
cufflinks 4.136        

0 Strain