Gene : Medtr4g101820 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10003:SF27 - COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE Description:  Cu/Zn-superoxide dismutase copper chaperone
Genomic Order:  5304 Name:  ? Medtr4g101820
Secondary Identifier:  ? PAC:31114665
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g101820 0.5kb upstream 0.5kb upstream 5465 true chr4: 42120014-42125478 Medicago truncatula
Medtr4g101820 0.5kb upstream 0.5kb upstream 500 false chr4: 42120014-42120513 Medicago truncatula
Medtr4g101820 0.5kb downstream 0.5kb downstream 5465 true chr4: 42120514-42125978 Medicago truncatula
Medtr4g101820 0.5kb downstream 0.5kb downstream 500 false chr4: 42125479-42125978 Medicago truncatula
Medtr4g101820 1.0kb upstream 1.0kb upstream 5965 true chr4: 42119514-42125478 Medicago truncatula
Medtr4g101820 1.0kb upstream 1.0kb upstream 1000 false chr4: 42119514-42120513 Medicago truncatula
Medtr4g101820 1.0kb downstream 1.0kb downstream 5965 true chr4: 42120514-42126478 Medicago truncatula
Medtr4g101820 1.0kb downstream 1.0kb downstream 1000 false chr4: 42125479-42126478 Medicago truncatula
Medtr4g101820 2.0kb upstream 2.0kb upstream 6965 true chr4: 42118514-42125478 Medicago truncatula
Medtr4g101820 2.0kb upstream 2.0kb upstream 2000 false chr4: 42118514-42120513 Medicago truncatula
Medtr4g101820 2.0kb downstream 2.0kb downstream 6965 true chr4: 42120514-42127478 Medicago truncatula
Medtr4g101820 2.0kb downstream 2.0kb downstream 2000 false chr4: 42125479-42127478 Medicago truncatula
Medtr4g101820 5.0kb upstream 5.0kb upstream 9965 true chr4: 42115514-42125478 Medicago truncatula
Medtr4g101820 5.0kb upstream 5.0kb upstream 5000 false chr4: 42115514-42120513 Medicago truncatula
Medtr4g101820 5.0kb downstream 5.0kb downstream 9965 true chr4: 42120514-42130478 Medicago truncatula
Medtr4g101820 5.0kb downstream 5.0kb downstream 5000 false chr4: 42125479-42130478 Medicago truncatula
Medtr4g101820 10.0kb upstream 10.0kb upstream 14965 true chr4: 42110514-42125478 Medicago truncatula
Medtr4g101820 10.0kb upstream 10.0kb upstream 10000 false chr4: 42110514-42120513 Medicago truncatula
Medtr4g101820 10.0kb downstream 10.0kb downstream 14965 true chr4: 42120514-42135478 Medicago truncatula
Medtr4g101820 10.0kb downstream 10.0kb downstream 10000 false chr4: 42125479-42135478 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302765 5265 Fabidae View MSA
124062271 5270 Rosid View MSA
123739046 5271 Pentapetalae View MSA
122793199 5272 Eudicot View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.903        
cufflinks 10.051     High  
cufflinks 13.327     High  
cufflinks 2.405       Low
cufflinks 23.431     High High
cufflinks 2.122       Low
cufflinks 4.854        
cufflinks 17.812     High High
cufflinks 4.225        

0 Strain