Gene : Medtr4g088740 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31614:SF15 - ARABINOGALACTAN PROTEIN 30-RELATED Description:  pollen Ole e I family allergens
Genomic Order:  4451 Name:  ? Medtr4g088740
Secondary Identifier:  ? PAC:31109082
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088740 0.5kb upstream 0.5kb upstream 1982 true chr4: 35334462-35336443 Medicago truncatula
Medtr4g088740 0.5kb upstream 0.5kb upstream 500 false chr4: 35335944-35336443 Medicago truncatula
Medtr4g088740 0.5kb downstream 0.5kb downstream 1982 true chr4: 35333962-35335943 Medicago truncatula
Medtr4g088740 0.5kb downstream 0.5kb downstream 500 false chr4: 35333962-35334461 Medicago truncatula
Medtr4g088740 1.0kb upstream 1.0kb upstream 2482 true chr4: 35334462-35336943 Medicago truncatula
Medtr4g088740 1.0kb upstream 1.0kb upstream 1000 false chr4: 35335944-35336943 Medicago truncatula
Medtr4g088740 1.0kb downstream 1.0kb downstream 2482 true chr4: 35333462-35335943 Medicago truncatula
Medtr4g088740 1.0kb downstream 1.0kb downstream 1000 false chr4: 35333462-35334461 Medicago truncatula
Medtr4g088740 2.0kb upstream 2.0kb upstream 3482 true chr4: 35334462-35337943 Medicago truncatula
Medtr4g088740 2.0kb upstream 2.0kb upstream 2000 false chr4: 35335944-35337943 Medicago truncatula
Medtr4g088740 2.0kb downstream 2.0kb downstream 3482 true chr4: 35332462-35335943 Medicago truncatula
Medtr4g088740 2.0kb downstream 2.0kb downstream 2000 false chr4: 35332462-35334461 Medicago truncatula
Medtr4g088740 5.0kb upstream 5.0kb upstream 6482 true chr4: 35334462-35340943 Medicago truncatula
Medtr4g088740 5.0kb upstream 5.0kb upstream 5000 false chr4: 35335944-35340943 Medicago truncatula
Medtr4g088740 5.0kb downstream 5.0kb downstream 6482 true chr4: 35329462-35335943 Medicago truncatula
Medtr4g088740 5.0kb downstream 5.0kb downstream 5000 false chr4: 35329462-35334461 Medicago truncatula
Medtr4g088740 10.0kb upstream 10.0kb upstream 11482 true chr4: 35334462-35345943 Medicago truncatula
Medtr4g088740 10.0kb upstream 10.0kb upstream 10000 false chr4: 35335944-35345943 Medicago truncatula
Medtr4g088740 10.0kb downstream 10.0kb downstream 11482 true chr4: 35324462-35335943 Medicago truncatula
Medtr4g088740 10.0kb downstream 10.0kb downstream 10000 false chr4: 35324462-35334461 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315534 5265 Fabidae View MSA
124066868 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09        
cufflinks 0.067     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.262        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.278        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain