Gene : Medtr4g088605 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31140:SF7 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR LEC2 Description:  B3 DNA-binding domain protein
Genomic Order:  4431 Name:  ? Medtr4g088605
Secondary Identifier:  ? PAC:31109810
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088605 0.5kb upstream 0.5kb upstream 2943 true chr4: 35228107-35231049 Medicago truncatula
Medtr4g088605 0.5kb upstream 0.5kb upstream 500 false chr4: 35228107-35228606 Medicago truncatula
Medtr4g088605 0.5kb downstream 0.5kb downstream 2943 true chr4: 35228607-35231549 Medicago truncatula
Medtr4g088605 0.5kb downstream 0.5kb downstream 500 false chr4: 35231050-35231549 Medicago truncatula
Medtr4g088605 1.0kb upstream 1.0kb upstream 3443 true chr4: 35227607-35231049 Medicago truncatula
Medtr4g088605 1.0kb upstream 1.0kb upstream 1000 false chr4: 35227607-35228606 Medicago truncatula
Medtr4g088605 1.0kb downstream 1.0kb downstream 3443 true chr4: 35228607-35232049 Medicago truncatula
Medtr4g088605 1.0kb downstream 1.0kb downstream 1000 false chr4: 35231050-35232049 Medicago truncatula
Medtr4g088605 2.0kb upstream 2.0kb upstream 4443 true chr4: 35226607-35231049 Medicago truncatula
Medtr4g088605 2.0kb upstream 2.0kb upstream 2000 false chr4: 35226607-35228606 Medicago truncatula
Medtr4g088605 2.0kb downstream 2.0kb downstream 4443 true chr4: 35228607-35233049 Medicago truncatula
Medtr4g088605 2.0kb downstream 2.0kb downstream 2000 false chr4: 35231050-35233049 Medicago truncatula
Medtr4g088605 5.0kb upstream 5.0kb upstream 7443 true chr4: 35223607-35231049 Medicago truncatula
Medtr4g088605 5.0kb upstream 5.0kb upstream 5000 false chr4: 35223607-35228606 Medicago truncatula
Medtr4g088605 5.0kb downstream 5.0kb downstream 7443 true chr4: 35228607-35236049 Medicago truncatula
Medtr4g088605 5.0kb downstream 5.0kb downstream 5000 false chr4: 35231050-35236049 Medicago truncatula
Medtr4g088605 10.0kb upstream 10.0kb upstream 12443 true chr4: 35218607-35231049 Medicago truncatula
Medtr4g088605 10.0kb upstream 10.0kb upstream 10000 false chr4: 35218607-35228606 Medicago truncatula
Medtr4g088605 10.0kb downstream 10.0kb downstream 12443 true chr4: 35228607-35241049 Medicago truncatula
Medtr4g088605 10.0kb downstream 10.0kb downstream 10000 false chr4: 35231050-35241049 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295184 5265 Fabidae View MSA
124068672 5270 Rosid View MSA
123744498 5271 Pentapetalae View MSA
122797179 5272 Eudicot View MSA
122050648 5273 Angiosperm View MSA
121351416 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.407        
cufflinks 1.225        
cufflinks 7.427       High
cufflinks 0.134       Low
cufflinks 0.669        
cufflinks 0.6        
cufflinks 0.586        
cufflinks 13.89     High High
cufflinks 0.358        

0 Strain