Gene : Medtr4g094860 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12419:SF7 - OTU DOMAIN-CONTAINING PROTEIN 3 Description:  OTU-like cysteine protease family protein
Genomic Order:  4980 Name:  ? Medtr4g094860
Secondary Identifier:  ? PAC:31109226
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094860 0.5kb upstream 0.5kb upstream 6402 true chr4: 39136695-39143096 Medicago truncatula
Medtr4g094860 0.5kb upstream 0.5kb upstream 500 false chr4: 39136695-39137194 Medicago truncatula
Medtr4g094860 0.5kb downstream 0.5kb downstream 6402 true chr4: 39137195-39143596 Medicago truncatula
Medtr4g094860 0.5kb downstream 0.5kb downstream 500 false chr4: 39143097-39143596 Medicago truncatula
Medtr4g094860 1.0kb upstream 1.0kb upstream 6902 true chr4: 39136195-39143096 Medicago truncatula
Medtr4g094860 1.0kb upstream 1.0kb upstream 1000 false chr4: 39136195-39137194 Medicago truncatula
Medtr4g094860 1.0kb downstream 1.0kb downstream 6902 true chr4: 39137195-39144096 Medicago truncatula
Medtr4g094860 1.0kb downstream 1.0kb downstream 1000 false chr4: 39143097-39144096 Medicago truncatula
Medtr4g094860 2.0kb upstream 2.0kb upstream 7902 true chr4: 39135195-39143096 Medicago truncatula
Medtr4g094860 2.0kb upstream 2.0kb upstream 2000 false chr4: 39135195-39137194 Medicago truncatula
Medtr4g094860 2.0kb downstream 2.0kb downstream 7902 true chr4: 39137195-39145096 Medicago truncatula
Medtr4g094860 2.0kb downstream 2.0kb downstream 2000 false chr4: 39143097-39145096 Medicago truncatula
Medtr4g094860 5.0kb upstream 5.0kb upstream 10902 true chr4: 39132195-39143096 Medicago truncatula
Medtr4g094860 5.0kb upstream 5.0kb upstream 5000 false chr4: 39132195-39137194 Medicago truncatula
Medtr4g094860 5.0kb downstream 5.0kb downstream 10902 true chr4: 39137195-39148096 Medicago truncatula
Medtr4g094860 5.0kb downstream 5.0kb downstream 5000 false chr4: 39143097-39148096 Medicago truncatula
Medtr4g094860 10.0kb upstream 10.0kb upstream 15902 true chr4: 39127195-39143096 Medicago truncatula
Medtr4g094860 10.0kb upstream 10.0kb upstream 10000 false chr4: 39127195-39137194 Medicago truncatula
Medtr4g094860 10.0kb downstream 10.0kb downstream 15902 true chr4: 39137195-39153096 Medicago truncatula
Medtr4g094860 10.0kb downstream 10.0kb downstream 10000 false chr4: 39143097-39153096 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296228 5265 Fabidae View MSA
124066483 5270 Rosid View MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.135        
cufflinks 0.15        
cufflinks 0.239       High
cufflinks 0.054     Low  
cufflinks 0.148        
cufflinks 0.017     Low Low
cufflinks 0.092        
cufflinks 0.197        
cufflinks 0.049     Low  

0 Strain