Gene : Medtr4g095080 M. truncatula Mt4.0v1
Defline:  (1 of 42) PF07899 - Frigida-like protein (Frigida) Description:  frigida-like protein
Genomic Order:  5029 Name:  ? Medtr4g095080
Secondary Identifier:  ? PAC:31110942
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g095080 0.5kb upstream 0.5kb upstream 3927 true chr4: 39678699-39682625 Medicago truncatula
Medtr4g095080 0.5kb upstream 0.5kb upstream 500 false chr4: 39678699-39679198 Medicago truncatula
Medtr4g095080 0.5kb downstream 0.5kb downstream 3927 true chr4: 39679199-39683125 Medicago truncatula
Medtr4g095080 0.5kb downstream 0.5kb downstream 500 false chr4: 39682626-39683125 Medicago truncatula
Medtr4g095080 1.0kb upstream 1.0kb upstream 4427 true chr4: 39678199-39682625 Medicago truncatula
Medtr4g095080 1.0kb upstream 1.0kb upstream 1000 false chr4: 39678199-39679198 Medicago truncatula
Medtr4g095080 1.0kb downstream 1.0kb downstream 4427 true chr4: 39679199-39683625 Medicago truncatula
Medtr4g095080 1.0kb downstream 1.0kb downstream 1000 false chr4: 39682626-39683625 Medicago truncatula
Medtr4g095080 2.0kb upstream 2.0kb upstream 5427 true chr4: 39677199-39682625 Medicago truncatula
Medtr4g095080 2.0kb upstream 2.0kb upstream 2000 false chr4: 39677199-39679198 Medicago truncatula
Medtr4g095080 2.0kb downstream 2.0kb downstream 5427 true chr4: 39679199-39684625 Medicago truncatula
Medtr4g095080 2.0kb downstream 2.0kb downstream 2000 false chr4: 39682626-39684625 Medicago truncatula
Medtr4g095080 5.0kb upstream 5.0kb upstream 8427 true chr4: 39674199-39682625 Medicago truncatula
Medtr4g095080 5.0kb upstream 5.0kb upstream 5000 false chr4: 39674199-39679198 Medicago truncatula
Medtr4g095080 5.0kb downstream 5.0kb downstream 8427 true chr4: 39679199-39687625 Medicago truncatula
Medtr4g095080 5.0kb downstream 5.0kb downstream 5000 false chr4: 39682626-39687625 Medicago truncatula
Medtr4g095080 10.0kb upstream 10.0kb upstream 13427 true chr4: 39669199-39682625 Medicago truncatula
Medtr4g095080 10.0kb upstream 10.0kb upstream 10000 false chr4: 39669199-39679198 Medicago truncatula
Medtr4g095080 10.0kb downstream 10.0kb downstream 13427 true chr4: 39679199-39692625 Medicago truncatula
Medtr4g095080 10.0kb downstream 10.0kb downstream 10000 false chr4: 39682626-39692625 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302805 5265 Fabidae View MSA
124069809 5270 Rosid View MSA
123742657 5271 Pentapetalae View MSA
122794403 5272 Eudicot View MSA
122049415 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.835        
cufflinks 4.144        
cufflinks 5.882       High
cufflinks 5.767        
cufflinks 5.258        
cufflinks 2.309       Low
cufflinks 3.552        
cufflinks 4.628        
cufflinks 4.282        

0 Strain