Gene : Medtr4g103550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Description:  SNF1-related kinase regulatory subunit gamma 1
Genomic Order:  5397 Name:  ? Medtr4g103550
Secondary Identifier:  ? PAC:31107439
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g103550 0.5kb upstream 0.5kb upstream 3654 true chr4: 42797980-42801633 Medicago truncatula
Medtr4g103550 0.5kb upstream 0.5kb upstream 500 false chr4: 42801134-42801633 Medicago truncatula
Medtr4g103550 0.5kb downstream 0.5kb downstream 3654 true chr4: 42797480-42801133 Medicago truncatula
Medtr4g103550 0.5kb downstream 0.5kb downstream 500 false chr4: 42797480-42797979 Medicago truncatula
Medtr4g103550 1.0kb upstream 1.0kb upstream 4154 true chr4: 42797980-42802133 Medicago truncatula
Medtr4g103550 1.0kb upstream 1.0kb upstream 1000 false chr4: 42801134-42802133 Medicago truncatula
Medtr4g103550 1.0kb downstream 1.0kb downstream 4154 true chr4: 42796980-42801133 Medicago truncatula
Medtr4g103550 1.0kb downstream 1.0kb downstream 1000 false chr4: 42796980-42797979 Medicago truncatula
Medtr4g103550 2.0kb upstream 2.0kb upstream 5154 true chr4: 42797980-42803133 Medicago truncatula
Medtr4g103550 2.0kb upstream 2.0kb upstream 2000 false chr4: 42801134-42803133 Medicago truncatula
Medtr4g103550 2.0kb downstream 2.0kb downstream 5154 true chr4: 42795980-42801133 Medicago truncatula
Medtr4g103550 2.0kb downstream 2.0kb downstream 2000 false chr4: 42795980-42797979 Medicago truncatula
Medtr4g103550 5.0kb upstream 5.0kb upstream 8154 true chr4: 42797980-42806133 Medicago truncatula
Medtr4g103550 5.0kb upstream 5.0kb upstream 5000 false chr4: 42801134-42806133 Medicago truncatula
Medtr4g103550 5.0kb downstream 5.0kb downstream 8154 true chr4: 42792980-42801133 Medicago truncatula
Medtr4g103550 5.0kb downstream 5.0kb downstream 5000 false chr4: 42792980-42797979 Medicago truncatula
Medtr4g103550 10.0kb upstream 10.0kb upstream 13154 true chr4: 42797980-42811133 Medicago truncatula
Medtr4g103550 10.0kb upstream 10.0kb upstream 10000 false chr4: 42801134-42811133 Medicago truncatula
Medtr4g103550 10.0kb downstream 10.0kb downstream 13154 true chr4: 42787980-42801133 Medicago truncatula
Medtr4g103550 10.0kb downstream 10.0kb downstream 10000 false chr4: 42787980-42797979 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314205 5265 Fabidae View MSA
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 344.416     High High
cufflinks 120.559     High  
cufflinks 213.498     High  
cufflinks 163.185     High  
cufflinks 86.325     High Low
cufflinks 70.312     High Low
cufflinks 202.692     High  
cufflinks 214.176     High  
cufflinks 183.358     High  

0 Strain