Gene : Medtr4g098650 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13832:SF340 - PROTEIN PHOSPHATASE 2C 29 Description:  protein phosphatase 2C family protein
Genomic Order:  5142 Name:  ? Medtr4g098650
Secondary Identifier:  ? PAC:31113923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g098650 0.5kb upstream 0.5kb upstream 6751 true chr4: 40667726-40674476 Medicago truncatula
Medtr4g098650 0.5kb upstream 0.5kb upstream 500 false chr4: 40667726-40668225 Medicago truncatula
Medtr4g098650 0.5kb downstream 0.5kb downstream 6751 true chr4: 40668226-40674976 Medicago truncatula
Medtr4g098650 0.5kb downstream 0.5kb downstream 500 false chr4: 40674477-40674976 Medicago truncatula
Medtr4g098650 1.0kb upstream 1.0kb upstream 7251 true chr4: 40667226-40674476 Medicago truncatula
Medtr4g098650 1.0kb upstream 1.0kb upstream 1000 false chr4: 40667226-40668225 Medicago truncatula
Medtr4g098650 1.0kb downstream 1.0kb downstream 7251 true chr4: 40668226-40675476 Medicago truncatula
Medtr4g098650 1.0kb downstream 1.0kb downstream 1000 false chr4: 40674477-40675476 Medicago truncatula
Medtr4g098650 2.0kb upstream 2.0kb upstream 8251 true chr4: 40666226-40674476 Medicago truncatula
Medtr4g098650 2.0kb upstream 2.0kb upstream 2000 false chr4: 40666226-40668225 Medicago truncatula
Medtr4g098650 2.0kb downstream 2.0kb downstream 8251 true chr4: 40668226-40676476 Medicago truncatula
Medtr4g098650 2.0kb downstream 2.0kb downstream 2000 false chr4: 40674477-40676476 Medicago truncatula
Medtr4g098650 5.0kb upstream 5.0kb upstream 11251 true chr4: 40663226-40674476 Medicago truncatula
Medtr4g098650 5.0kb upstream 5.0kb upstream 5000 false chr4: 40663226-40668225 Medicago truncatula
Medtr4g098650 5.0kb downstream 5.0kb downstream 11251 true chr4: 40668226-40679476 Medicago truncatula
Medtr4g098650 5.0kb downstream 5.0kb downstream 5000 false chr4: 40674477-40679476 Medicago truncatula
Medtr4g098650 10.0kb upstream 10.0kb upstream 16251 true chr4: 40658226-40674476 Medicago truncatula
Medtr4g098650 10.0kb upstream 10.0kb upstream 10000 false chr4: 40658226-40668225 Medicago truncatula
Medtr4g098650 10.0kb downstream 10.0kb downstream 16251 true chr4: 40668226-40684476 Medicago truncatula
Medtr4g098650 10.0kb downstream 10.0kb downstream 10000 false chr4: 40674477-40684476 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122796170 5272 Eudicot View MSA
122310977 5265 Fabidae View MSA
124067755 5270 Rosid View MSA
123739663 5271 Pentapetalae View MSA
122050324 5273 Angiosperm View MSA
121349190 5274 Embryophyte View MSA
123381206 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.407     High High
cufflinks 0.576       Low
cufflinks 0.597        
cufflinks 3.511        
cufflinks 0.86        
cufflinks 1.341        
cufflinks 5.308        
cufflinks 0.646        
cufflinks 6.132        

0 Strain