Gene : Medtr4g098500 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31747:SF1 - PROTEIN LOL1 Description:  LSD1-type zinc finger protein
Genomic Order:  5130 Name:  ? Medtr4g098500
Secondary Identifier:  ? PAC:31106482
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g098500 0.5kb upstream 0.5kb upstream 3816 true chr4: 40583419-40587234 Medicago truncatula
Medtr4g098500 0.5kb upstream 0.5kb upstream 500 false chr4: 40586735-40587234 Medicago truncatula
Medtr4g098500 0.5kb downstream 0.5kb downstream 3816 true chr4: 40582919-40586734 Medicago truncatula
Medtr4g098500 0.5kb downstream 0.5kb downstream 500 false chr4: 40582919-40583418 Medicago truncatula
Medtr4g098500 1.0kb upstream 1.0kb upstream 4316 true chr4: 40583419-40587734 Medicago truncatula
Medtr4g098500 1.0kb upstream 1.0kb upstream 1000 false chr4: 40586735-40587734 Medicago truncatula
Medtr4g098500 1.0kb downstream 1.0kb downstream 4316 true chr4: 40582419-40586734 Medicago truncatula
Medtr4g098500 1.0kb downstream 1.0kb downstream 1000 false chr4: 40582419-40583418 Medicago truncatula
Medtr4g098500 2.0kb upstream 2.0kb upstream 5316 true chr4: 40583419-40588734 Medicago truncatula
Medtr4g098500 2.0kb upstream 2.0kb upstream 2000 false chr4: 40586735-40588734 Medicago truncatula
Medtr4g098500 2.0kb downstream 2.0kb downstream 5316 true chr4: 40581419-40586734 Medicago truncatula
Medtr4g098500 2.0kb downstream 2.0kb downstream 2000 false chr4: 40581419-40583418 Medicago truncatula
Medtr4g098500 5.0kb upstream 5.0kb upstream 8316 true chr4: 40583419-40591734 Medicago truncatula
Medtr4g098500 5.0kb upstream 5.0kb upstream 5000 false chr4: 40586735-40591734 Medicago truncatula
Medtr4g098500 5.0kb downstream 5.0kb downstream 8316 true chr4: 40578419-40586734 Medicago truncatula
Medtr4g098500 5.0kb downstream 5.0kb downstream 5000 false chr4: 40578419-40583418 Medicago truncatula
Medtr4g098500 10.0kb upstream 10.0kb upstream 13316 true chr4: 40583419-40596734 Medicago truncatula
Medtr4g098500 10.0kb upstream 10.0kb upstream 10000 false chr4: 40586735-40596734 Medicago truncatula
Medtr4g098500 10.0kb downstream 10.0kb downstream 13316 true chr4: 40573419-40586734 Medicago truncatula
Medtr4g098500 10.0kb downstream 10.0kb downstream 10000 false chr4: 40573419-40583418 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310386 5265 Fabidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.498        
cufflinks 11.925     High  
cufflinks 12.62     High High
cufflinks 0.342        
cufflinks 12.805     High High
cufflinks 0.524        
cufflinks 0.261        
cufflinks 13.885     High High
cufflinks 0.099       Low

0 Strain