Gene : Medtr4g097800 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11504 - CYTOCHROME C OXIDASE POLYPEPTIDE VIA Description:  cytochrome C oxidase
Genomic Order:  5114 Name:  ? Medtr4g097800
Secondary Identifier:  ? PAC:31106335
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3781 Medicago truncatula pathologic  
Mtruncatula PWY-7279 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g097800 0.5kb upstream 0.5kb upstream 3895 true chr4: 40370401-40374295 Medicago truncatula
Medtr4g097800 0.5kb upstream 0.5kb upstream 500 false chr4: 40373796-40374295 Medicago truncatula
Medtr4g097800 0.5kb downstream 0.5kb downstream 3895 true chr4: 40369901-40373795 Medicago truncatula
Medtr4g097800 0.5kb downstream 0.5kb downstream 500 false chr4: 40369901-40370400 Medicago truncatula
Medtr4g097800 1.0kb upstream 1.0kb upstream 4395 true chr4: 40370401-40374795 Medicago truncatula
Medtr4g097800 1.0kb upstream 1.0kb upstream 1000 false chr4: 40373796-40374795 Medicago truncatula
Medtr4g097800 1.0kb downstream 1.0kb downstream 4395 true chr4: 40369401-40373795 Medicago truncatula
Medtr4g097800 1.0kb downstream 1.0kb downstream 1000 false chr4: 40369401-40370400 Medicago truncatula
Medtr4g097800 2.0kb upstream 2.0kb upstream 5395 true chr4: 40370401-40375795 Medicago truncatula
Medtr4g097800 2.0kb upstream 2.0kb upstream 2000 false chr4: 40373796-40375795 Medicago truncatula
Medtr4g097800 2.0kb downstream 2.0kb downstream 5395 true chr4: 40368401-40373795 Medicago truncatula
Medtr4g097800 2.0kb downstream 2.0kb downstream 2000 false chr4: 40368401-40370400 Medicago truncatula
Medtr4g097800 5.0kb upstream 5.0kb upstream 8395 true chr4: 40370401-40378795 Medicago truncatula
Medtr4g097800 5.0kb upstream 5.0kb upstream 5000 false chr4: 40373796-40378795 Medicago truncatula
Medtr4g097800 5.0kb downstream 5.0kb downstream 8395 true chr4: 40365401-40373795 Medicago truncatula
Medtr4g097800 5.0kb downstream 5.0kb downstream 5000 false chr4: 40365401-40370400 Medicago truncatula
Medtr4g097800 10.0kb upstream 10.0kb upstream 13395 true chr4: 40370401-40383795 Medicago truncatula
Medtr4g097800 10.0kb upstream 10.0kb upstream 10000 false chr4: 40373796-40383795 Medicago truncatula
Medtr4g097800 10.0kb downstream 10.0kb downstream 13395 true chr4: 40360401-40373795 Medicago truncatula
Medtr4g097800 10.0kb downstream 10.0kb downstream 10000 false chr4: 40360401-40370400 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311476 5265 Fabidae View MSA
124061268 5270 Rosid View MSA
123742807 5271 Pentapetalae View MSA
122787280 5272 Eudicot View MSA
122043726 5273 Angiosperm View MSA
121349010 5274 Embryophyte View MSA
123424511 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.516     High  
cufflinks 13.758     High  
cufflinks 13.402     High  
cufflinks 65.069     High High
cufflinks 17.678     High  
cufflinks 91.317     High High
cufflinks 28.538     High  
cufflinks 12.551     High  
cufflinks 43.255     High  

0 Strain