Gene : Medtr4g134610 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11262:SF4 - ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL Description:  AAA domain, Cdc48 subfamily protein
Genomic Order:  7295 Name:  ? Medtr4g134610
Secondary Identifier:  ? PAC:31111163
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g134610 0.5kb upstream 0.5kb upstream 2384 true chr4: 56398853-56401236 Medicago truncatula
Medtr4g134610 0.5kb upstream 0.5kb upstream 500 false chr4: 56398853-56399352 Medicago truncatula
Medtr4g134610 0.5kb downstream 0.5kb downstream 2384 true chr4: 56399353-56401736 Medicago truncatula
Medtr4g134610 0.5kb downstream 0.5kb downstream 500 false chr4: 56401237-56401736 Medicago truncatula
Medtr4g134610 1.0kb upstream 1.0kb upstream 2884 true chr4: 56398353-56401236 Medicago truncatula
Medtr4g134610 1.0kb upstream 1.0kb upstream 1000 false chr4: 56398353-56399352 Medicago truncatula
Medtr4g134610 1.0kb downstream 1.0kb downstream 2884 true chr4: 56399353-56402236 Medicago truncatula
Medtr4g134610 1.0kb downstream 1.0kb downstream 1000 false chr4: 56401237-56402236 Medicago truncatula
Medtr4g134610 2.0kb upstream 2.0kb upstream 3884 true chr4: 56397353-56401236 Medicago truncatula
Medtr4g134610 2.0kb upstream 2.0kb upstream 2000 false chr4: 56397353-56399352 Medicago truncatula
Medtr4g134610 2.0kb downstream 2.0kb downstream 3884 true chr4: 56399353-56403236 Medicago truncatula
Medtr4g134610 2.0kb downstream 2.0kb downstream 2000 false chr4: 56401237-56403236 Medicago truncatula
Medtr4g134610 5.0kb upstream 5.0kb upstream 6884 true chr4: 56394353-56401236 Medicago truncatula
Medtr4g134610 5.0kb upstream 5.0kb upstream 5000 false chr4: 56394353-56399352 Medicago truncatula
Medtr4g134610 5.0kb downstream 5.0kb downstream 6884 true chr4: 56399353-56406236 Medicago truncatula
Medtr4g134610 5.0kb downstream 5.0kb downstream 5000 false chr4: 56401237-56406236 Medicago truncatula
Medtr4g134610 10.0kb upstream 10.0kb upstream 11884 true chr4: 56389353-56401236 Medicago truncatula
Medtr4g134610 10.0kb upstream 10.0kb upstream 10000 false chr4: 56389353-56399352 Medicago truncatula
Medtr4g134610 10.0kb downstream 10.0kb downstream 11884 true chr4: 56399353-56411236 Medicago truncatula
Medtr4g134610 10.0kb downstream 10.0kb downstream 10000 false chr4: 56401237-56411236 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121624374 5273 Angiosperm Singleton cluster - no MSA
122262212 5265 Fabidae Singleton cluster - no MSA
124003470 5270 Rosid Singleton cluster - no MSA
123577616 5271 Pentapetalae Singleton cluster - no MSA
122612327 5272 Eudicot Singleton cluster - no MSA
120896478 5274 Embryophyte Singleton cluster - no MSA
122937133 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.143        
cufflinks 0.776        
cufflinks 1.014        
cufflinks 0.038     Low Low
cufflinks 0.828        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099        
cufflinks 0.878        
cufflinks 0.016     Low Low

0 Strain